Construct: ORF ccsbBroadEn_12514

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008624.1_s300c1, BRDN0000392588
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MPPE1 (65258)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 65258 MPPE1 metallophosphoesterase 1 NM_001242904.2 100% 100%
2 human 65258 MPPE1 metallophosphoesterase 1 NM_001319154.2 100% 100%
3 human 65258 MPPE1 metallophosphoesterase 1 NM_001330563.2 89% 89% 677_799del
4 human 65258 MPPE1 metallophosphoesterase 1 XM_017025927.2 89% 89% 677_799del
5 human 65258 MPPE1 metallophosphoesterase 1 XM_017025928.1 89% 89% 677_799del
6 human 65258 MPPE1 metallophosphoesterase 1 XM_017025929.2 89% 89% 677_799del
7 human 65258 MPPE1 metallophosphoesterase 1 XM_011525734.2 85.8% 85.8% 677_678ins141
8 human 65258 MPPE1 metallophosphoesterase 1 XM_024451237.1 85.8% 85.8% 677_678ins141
9 human 65258 MPPE1 metallophosphoesterase 1 NM_023075.6 84% 84% 677_865del
10 human 65258 MPPE1 metallophosphoesterase 1 XM_006722346.3 84% 84% 677_865del
11 human 65258 MPPE1 metallophosphoesterase 1 XM_017025922.2 84% 84% 677_865del
12 human 65258 MPPE1 metallophosphoesterase 1 XM_017025923.2 84% 84% 677_865del
13 human 65258 MPPE1 metallophosphoesterase 1 XM_017025924.2 84% 84% 677_865del
14 human 65258 MPPE1 metallophosphoesterase 1 XM_017025925.1 84% 84% 677_865del
15 human 65258 MPPE1 metallophosphoesterase 1 XM_017025926.2 84% 84% 677_865del
16 human 65258 MPPE1 metallophosphoesterase 1 XM_006722340.3 83.8% 83.8% 677_868del
17 human 65258 MPPE1 metallophosphoesterase 1 XM_006722341.4 83.8% 83.8% 677_868del
18 human 65258 MPPE1 metallophosphoesterase 1 XM_006722342.4 83.8% 83.8% 677_868del
19 human 65258 MPPE1 metallophosphoesterase 1 XM_006722343.3 83.8% 83.8% 677_868del
20 human 65258 MPPE1 metallophosphoesterase 1 XM_006722345.4 83.8% 83.8% 677_868del
21 human 65258 MPPE1 metallophosphoesterase 1 XM_011525731.3 83.8% 83.8% 677_868del
22 human 65258 MPPE1 metallophosphoesterase 1 XM_017025920.2 83.8% 83.8% 677_868del
23 human 65258 MPPE1 metallophosphoesterase 1 XM_017025931.1 79.3% 68.7% (many diffs)
24 human 65258 MPPE1 metallophosphoesterase 1 XM_006722348.2 77.9% 65.7% (many diffs)
25 human 65258 MPPE1 metallophosphoesterase 1 XM_017025930.2 69.8% 69.1% (many diffs)
26 human 65258 MPPE1 metallophosphoesterase 1 XM_011525732.2 69.6% 69% (many diffs)
27 human 65258 MPPE1 metallophosphoesterase 1 XR_935068.3 56.8% 1_346del;1023_1307del;1557_1558ins73
28 human 65258 MPPE1 metallophosphoesterase 1 XR_001753265.2 56.1% 1_242del;919_1203del;1527_1780del
29 human 65258 MPPE1 metallophosphoesterase 1 XR_002958184.1 51.9% (many diffs)
30 human 65258 MPPE1 metallophosphoesterase 1 XR_002958183.1 51.8% (many diffs)
31 human 65258 MPPE1 metallophosphoesterase 1 XR_001753263.2 50% (many diffs)
32 human 65258 MPPE1 metallophosphoesterase 1 XR_001753264.2 49.2% (many diffs)
33 human 65258 MPPE1 metallophosphoesterase 1 XR_001753261.1 37.9% (many diffs)
34 human 65258 MPPE1 metallophosphoesterase 1 XR_001753262.2 34.4% (many diffs)
35 human 65258 MPPE1 metallophosphoesterase 1 NR_040241.2 28.5% (many diffs)
36 human 65258 MPPE1 metallophosphoesterase 1 NR_040243.2 28.5% (many diffs)
37 human 65258 MPPE1 metallophosphoesterase 1 NR_040242.4 27.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1065
ORF length:
999
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGC GATGATCGAA TTGGGGTTTG GAAGACAGAA TTTTCATCCA TTAAAGAGGA
121AGAGTTCATT GCTGTTGAAA CTCATAGCTG TTGTCTTTGC TGTGCTTCTA TTTTGTGAAT
181TTTTAATCTA TTACTTAGCG ATCTTTCAGT GTAATTGGCC TGAAGTGAAA ACCACAGCCT
241CTGATGGTGA ACAGACCACA CGTGAGCCTG TGCTCAAAGC CATGTTTTTG GCTGACACCC
301ATTTGCTTGG GGAATTCCTA GGCCACTGGC TGGACAAATT ACGAAGGGAA TGGCAGATGG
361AGAGAGCGTT CCAGACAGCT CTGTGGTTGC TGCAGCCGGA AGTCGTCTTC ATCCTGGGGG
421ATATCTTTGA TGAAGGGAAG TGGAGCACCC CTGAGGCCTG GGCGGATGAT GTGGAGCGGT
481TTCAGAAAAT GTTCAGACAC CCAAGTCATG TACAGCTGAA GGTAGTTGCT GGAAACCATG
541ACATTGGCTT CCATTATGAG ATGAACACAT ACAAAGTAGA ACGCTTTGAG AAAGTGTTCA
601GCTCTGAAAG ACTGTTTTCT TGGAAAGGCA TTAACTTTGT GATGGTCAAC AGCGTGGCGC
661TGAACGGGGA TGGCTGTGGC ATCTGCTCTG AAACAGAAGC AGAGCTCATT GAAGTTTCTC
721ACAGACTGAA CTGCTCCCGA GAGCTGCTGT GGTGGCTCCA GCCGCGCCTG GTTCTCAGTG
781GCCACACGCA CAGCGCCTGC GAGGTGCACC ACGGGGGCCG AGTCCCCGAG CTCAGCGTCC
841CATCTTTCAG TTGGAGGAAC AGAAACAACC CCAGTTTCAT CATGGGTAGC ATCACGCCCA
901CAGACTACAC CCTCTCCAAG TGCTACCTCC CACGTGAGGA TGTGGTTTTG ATCATCTACT
961GTGGAGTGGT GGGCTTCCTT GTGGTCCTCA CACTCACTCA CTTTGGGCTT CTAGCCTCAC
1021CTTTTCTTTC TGGTTTGAAC TTGCTCGGAA AGCGTAAGAC AAGATGCCCA ACTTTCTTGT
1081ACAAAGTtgg cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)