Construct: ORF ccsbBroadEn_12820

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008894.1_s300c1, BRDN0000386968
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF512 (84450)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 84450 ZNF512 zinc finger protein 512 NM_001271287.1 100% 100%
2 human 84450 ZNF512 zinc finger protein 512 NM_001271288.1 100% 100%
3 human 84450 ZNF512 zinc finger protein 512 NM_001271318.1 100% 100%
4 human 84450 ZNF512 zinc finger protein 512 NM_001271289.1 94.2% 94.2% 141_142ins84
5 human 84450 ZNF512 zinc finger protein 512 NM_032434.4 86.4% 86.4% 1_231del
6 human 84450 ZNF512 zinc finger protein 512 NM_001271286.1 81.6% 81.6% 1_228del;369_370ins84
7 mouse 269639 Zfp512 zinc finger protein 512 XM_006503968.2 84.2% 86% (many diffs)
8 mouse 269639 Zfp512 zinc finger protein 512 NM_172993.3 72.8% 74.3% (many diffs)
9 mouse 269639 Zfp512 zinc finger protein 512 XM_006503970.3 47.5% 48.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1536
ORF length:
1470
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAA GATGAGAAGA ATCAAGCCAG CTGCTACTTC TCATGTCGAA GGGTCAGGTG
121GAGTATCAGC CAAGGGGAAA AGGAAACCCA GGCAGGAAGA AGATGAAGAC TATCGAGAAT
181TTCCTCAGAA GAAGCATAAG CTTTATGGGA GGAAGCAACG GCCTAAAACT CAGCCCAATC
241CCAAATCCCA GGCCCGTCGT ATTCGGAAGG AACCACCAGT TTATGCAGCA GGCAGTTTGG
301AGGAGCAATG GTACTTAGAA ATCGTTGATA AAGGCAGTGT CTCCTGCCCT ACCTGCCAGG
361CAGTGGGGAG GAAGACCATA GAGGGTTTAA AGAAACACAT GGAAAACTGC AAGCAGGAAA
421TGTTTACTTG TCATCATTGT GGGAAACAAC TTCGTTCACT GGCAGGGATG AAGTATCATG
481TCATGGCAAA TCATAATAGT TTGCCCATTT TGAAAGCCGG AGATGAAATA GATGAGCCAA
541GTGAGAGGGA AAGGCTCCGA ACAGTTCTAA AGAGACTGGG AAAGCTCAGG TGCATGCGTG
601AGAGTTGCTC CAGTAGCTTC ACCAGCATCA TGGGATATCT CTACCATGTC AGAAAATGTG
661GCAAAGGGGC TGCAGAGCTG GAAAAGATGA CCCTGAAATG TCACCACTGT GGAAAACCAT
721ATAGGTCGAA GGCTGGACTT GCATATCACC TGAGGTCAGA GCATGGGCCT ATATCCTTCT
781TTCCAGAGTC AGGACAGCCA GAGTGCTTAA AGGAGATGAA CCTAGAGTCA AAGAGTGGGG
841GCCGAGTTCA GAGACGTTCT GCCAAGATAG CTGTATACCA CCTACAGGAG CTGGCCTCTG
901CTGAACTGGC CAAGGAATGG CCCAAGAGGA AGGTGCTTCA GGACCTGGTA CCTGATGATC
961GAAAGTTAAA ATATACTCGT CCAGGGCTCC CTACCTTCAG CCAGGAAGTA CTACATAAAT
1021GGAAGACAGA TATCAAGAAA TATCATCGTA TTCAGTGTCC TAACCAGGGC TGTGAGGCTG
1081TCTACAGCAG TGTATCTGGC CTTAAAGCTC ACCTGGGCTC TTGTACATTG GGAAACTTTG
1141TGGCTGGAAA ATACAAATGT CTTCTATGTC AGAAAGAATT TGTGTCAGAG AGTGGTGTCA
1201AGTATCACAT CAACTCCGTC CATGCTGAGG ACTGGTTCGT TGTAAACCCA ACAACAACCA
1261AAAGCTTTGA AAAGCTGATG AAGATAAAGC AGCGGCAGCA AGAAGAAGAA AAGCGGAGGC
1321AGCAGCACAG GAGCAGAAGG TCTCTAAGAA GGCGGCAGCA GCCTGGCATT GAGCTTCCCG
1381AGACAGAGCT GAGTCTTAGA GTAGGGAAGG ATCAGAGGAG GAATAATGAG GAACTGGTAG
1441TGTCAGCCTC CTGTAAGGAA CCAGAGCAGG AGCCAGTGCC AGCACAGTTC CAGAAAGTAA
1501AGCCCCCAAA GACTAATCAT AAACGAGGAA GGAAATACCC AACTTTCTTG TACAAAGTtg
1561gcattataag aaagcattgc ttatcaattt gttgcaacga ac

Download FASTA (ORF) (Full)

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