Construct: ORF ccsbBroadEn_13041

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002125.1_s300c1, BRDN0000390377
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OSBPL6 (114880)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 114880 OSBPL6 oxysterol binding protein l... XM_017003274.2 56.9% 54.5% (many diffs)
2 human 114880 OSBPL6 oxysterol binding protein l... XM_017003275.1 56.9% 54.5% (many diffs)
3 human 114880 OSBPL6 oxysterol binding protein l... NM_001201482.1 54.9% 52.6% (many diffs)
4 human 114880 OSBPL6 oxysterol binding protein l... XM_017003271.2 54.9% 52.6% (many diffs)
5 human 114880 OSBPL6 oxysterol binding protein l... NM_001201481.2 54.6% 52.3% (many diffs)
6 human 114880 OSBPL6 oxysterol binding protein l... XM_017003270.1 54.6% 52.3% (many diffs)
7 human 114880 OSBPL6 oxysterol binding protein l... XM_017003268.2 53.5% 51.2% (many diffs)
8 human 114880 OSBPL6 oxysterol binding protein l... XM_017003269.2 53.5% 51.2% (many diffs)
9 human 114880 OSBPL6 oxysterol binding protein l... XM_017003277.2 53.3% 51% (many diffs)
10 human 114880 OSBPL6 oxysterol binding protein l... NM_032523.4 52.8% 50.6% (many diffs)
11 human 114880 OSBPL6 oxysterol binding protein l... XM_017003276.2 51.5% 49.2% (many diffs)
12 human 114880 OSBPL6 oxysterol binding protein l... NM_001201480.2 51.5% 49.3% (many diffs)
13 human 114880 OSBPL6 oxysterol binding protein l... XM_017003266.1 51.5% 49.3% (many diffs)
14 human 114880 OSBPL6 oxysterol binding protein l... XM_017003267.2 51.5% 49.3% (many diffs)
15 human 114880 OSBPL6 oxysterol binding protein l... XM_017003273.2 51.2% 49% (many diffs)
16 human 114880 OSBPL6 oxysterol binding protein l... XM_017003272.2 50.1% 47.9% (many diffs)
17 human 114880 OSBPL6 oxysterol binding protein l... XM_017003265.2 49.8% 44.7% (many diffs)
18 human 114880 OSBPL6 oxysterol binding protein l... NM_145739.3 48.6% 46.1% (many diffs)
19 human 114880 OSBPL6 oxysterol binding protein l... XM_011510539.2 48.2% 46.2% (many diffs)
20 human 114880 OSBPL6 oxysterol binding protein l... XM_024452655.1 39.7% 37.5% (many diffs)
21 human 114880 OSBPL6 oxysterol binding protein l... XM_024452654.1 38.2% 36.1% (many diffs)
22 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239869.1 67.7% 72.1% (many diffs)
23 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239868.2 49.6% 51.5% (many diffs)
24 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239867.2 49.1% 50.9% (many diffs)
25 mouse 99031 Osbpl6 oxysterol binding protein-l... NM_001290734.1 48.3% 50.1% (many diffs)
26 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239866.2 48% 49.8% (many diffs)
27 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239865.2 47.8% 49.6% (many diffs)
28 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239864.2 47.5% 49.3% (many diffs)
29 mouse 99031 Osbpl6 oxysterol binding protein-l... NM_001290733.1 46.7% 48.5% (many diffs)
30 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239862.2 46.7% 48.5% (many diffs)
31 mouse 99031 Osbpl6 oxysterol binding protein-l... NM_145525.3 46.3% 48% (many diffs)
32 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239859.2 46.3% 48% (many diffs)
33 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239860.2 46.3% 48% (many diffs)
34 mouse 99031 Osbpl6 oxysterol binding protein-l... XM_011239861.2 46.3% 48% (many diffs)
35 mouse 99031 Osbpl6 oxysterol binding protein-l... NM_001290735.1 11.4% 12.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1590
ORF length:
1524
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG TTCAGATGAG AAGGGCATTT CCCCTGCTCA TAAAACATCC ACTCCAACCC
121ATAGAAGTGC CTCCTCTTCA ACATCCTCCC AAAGGGACAG TAGGCAGAGT ATTCACATAC
181TGGAGAGGAC TGCTTCCTCT AGCACCGAGC CCTCTGTAAG TCGGCAATTG CTAGAACCGG
241AGCCAGTCCC CCTCTCCAAG GAAGCTGACA GCTGGGAAAT TATAGAAGGG CTGAAAATAG
301GCCAAACCAA TGTCCAGAAA CCAGACAAAC ATGAGGGCTT TATGCTGAAG AAAAGAAAAT
361GGCCTTTAAA AGGCTGGCAC AAGCGTTTTT TTGTCCTGGA TAATGGAATG TTAAAGTATT
421CAAAGGCACC ACTCGATATT CAGAAAGGAA AGGTCCATGG GAGCATAGAT GTGGGACTCT
481CAGTCATGTC AATTAAAAAG AAAGCTCGAA GAATAGACCT TGACACCGAA GAGCACATCT
541ATCATTTGAA GGTGAAATCC CAGGACTGGT TTGATGCATG GGTCTCCAAA CTGCGACATC
601ATCGGTTGTA TCGTCAGAAT GAAATTGTGA GATCACCAAG AGATGCTAGT TTTCACATAT
661TTCCTTCAAC GTCCACAGCT GAATCCTCAC CAGCTGCTAA TGTTTCTGTA ATGGATGGAA
721AGATGCAACC AAACAGCTTT CCGTGGCAGT CCCCTTTACC ATGCAGCAAT AGCCTCCCTG
781CAACGTGCAC AACTGGCCAG AGTAAAGTGG CAGCCTGGTT ACAGGACTCG GAAGAGATGG
841ACAGGTGTGC AGAAGATCTT GCACATTGCC AGTCAAACCT TGTGGAACTT AGCAAACTCC
901TGCAAAATTT GGAAATACTT CAGAGAACTC AGTCAGCACC TAACTTTACT GACATGCAGG
961TTCCTTTCAG TGCTACCATG TCACCAGTTC GCTTGCATTC CTCCAACCCC AACCTTTGTG
1021CAGATATTGA ATTTCAGACT CCCCCTAGCC ACCTCACTGA CCCTCTGGAA AGTTCAACAG
1081ATTATACAAA GCTGCAAGAA GAATTTTGTC TAATCGCACA GAAAGTGCAT TCTCTTTTGA
1141AGTCTGCATT TAATAGCATA GCTATAGAGA AGGAGAAGCT GAAGCAGATG GTTTCCGAGC
1201AGGATCACAG TAAAGGCCAC AGCACGCAGA TGGCACGGCT CCGACAGTCA CTGTCTCAGG
1261CTGGTGAGCA AATCCATGTC AGTCTCCCCT TATCACAGCA AGTAGCCAAT GAGAGCCGCC
1321TCTCCATGTC AGAGTCTGTT TCTGAGTTCT TTGATGCCCA AGAGGTGCTC CTCTCTGCAA
1381GTTCGTCAGA GAATGAGGCT TCAGATGATG AGTCTTACAT CAGTGATGTG AGTGATAATA
1441TATCTGAAGA CAACACCAGT GTTGCAGACA ATATTTCTCG GCAAAGTATG CATCATTTGA
1501GCTTCCAGGT TGTTCTATCT ACATGCCAAA TTGCAACACG AAGACTTAAT GAACAGGCAT
1561TCCCCCTCCC ACGCCACCCC CACCCCTGCT ACCCAACTTT CTTGTACAAA GTtggcatta
1621taagaaagca ttgcttatca atttgttgca acgaac

Download FASTA (ORF) (Full)