Construct: ORF ccsbBroadEn_13042

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011143.1_s300c1, BRDN0000389455
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OSBPL11 (114885)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 114885 OSBPL11 oxysterol binding protein l... NM_022776.5 49.1% 49.1% 1_1140del
2 human 114885 OSBPL11 oxysterol binding protein l... XR_001739992.2 25.8% (many diffs)
3 mouse 106326 Osbpl11 oxysterol binding protein-l... XM_011245797.2 46.1% 49.1% (many diffs)
4 mouse 106326 Osbpl11 oxysterol binding protein-l... NM_176840.3 42% 44.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1167
ORF length:
1101
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGGA TTTAACAAGA GTGGTGCTTC CTACATTTAT CCTAGAGAAG CGTTCCTTGC
121TGGAAATGTA TGCAGACTTT ATGTCTCATC CAGACCTATT TATAGCCATC ACTAATGGAG
181CCACAGCTGA GGACAGAATG ATTCGCTTTG TTGAGTACTA CCTTACCTCA TTTCATGAAG
241GCCGTAAGGG AGCCATTGCT AAAAAACCAT ACAATCCTAT CATTGGAGAA ACATTTCACT
301GTTCCTGGAA GATGCCAAAA AGCGAGGTAG CATCCAGTGT TTTTAGCAGT TCTTCCACCC
361AGGGAGTCAC AAATCATGCT CCTTTATCGG GGGAGTCTTT GACCCAGGTG GGATCAGACT
421GTTACACAGT CAGATTTGTT GCTGAGCAGG TTTCTCATCA TCCTCCAGTC TCAGGATTTT
481ATGCAGAATG TACAGAGAGG AAGATGTGTG TAAATGCGCA TGTCTGGACT AAGAGCAAGT
541TCTTAGGCAT GTCAATAGGC GTGACAATGG TTGGAGAAGG TATCCTTAGT CTGTTGGAGC
601ATGGAGAAGA GTACACATTT TCTCTACCCT GTGCATATGC TCGGTCAATT TTGACTGTTC
661CTTGGGTAGA ACTGGGTGGC AAAGTCAGTG TCAACTGTGC AAAAACTGGA TATTCAGCCA
721GCATCACTTT TCATACCAAG CCATTTTATG GTGGCAAACT GCATCGGGTT ACAGCTGAAG
781TAAAGCACAA CATCACCAAC ACTGTGGTAT GCAGAGTGCA AGGGGAATGG AATAGTGTTC
841TTGAGTTCAC ATATAGCAAT GGAGAGACAA AGTATGTGGA CTTGACTAAA TTGGCAGTGA
901CGAAGAAAAG AGTGAGACCT CTGGAGAAGC AGGATCCATT TGAATCCAGG CGATTGTGGA
961AAAATGTGAC AGACTCGCTG AGAGAATCTG AAATTGATAA GGCCACAGAG CATAAGCATA
1021CCCTGGAAGA ACGTCAGAGG ACTGAAGAAA GGCATCGTAC TGAAACAGGC ACACCTTGGA
1081AAACCAAATA TTTTATTAAA GAGGGAGATG GCTGGGTTTA TCATAAACCA CTTTGGAAAA
1141TAATTCCAAC AACACAACCA GCAGAGTGCC CAACTTTCTT GTACAAAGTt ggcattataa
1201gaaagcattg cttatcaatt tgttgcaacg aac

Download FASTA (ORF) (Full)