Construct: ORF ccsbBroadEn_13395

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011048.1_s300c1, BRDN0000397051
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM184A (202915)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 202915 TMEM184A transmembrane protein 184A NM_001097620.2 99.5% 99.2% 53C>T;1166_1167insCGG;1168A>G
2 human 202915 TMEM184A transmembrane protein 184A XM_006715653.1 93.2% 45.2% (many diffs)
3 human 202915 TMEM184A transmembrane protein 184A XM_011515164.1 88.7% 41.5% (many diffs)
4 human 202915 TMEM184A transmembrane protein 184A XM_011515165.2 78.4% 53.1% (many diffs)
5 human 202915 TMEM184A transmembrane protein 184A XM_011515166.2 51.7% 51.4% 53C>T;645_645delGins598
6 human 202915 TMEM184A transmembrane protein 184A XR_001744577.2 22.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1308
ORF length:
1242
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaaCTTTG TACAAAAAAG
61TTGGCATGAG TAATGTCTCA GGGATCCTGG AGACAGCCGG CGTCCCCCTG GTGTCAGTGA
121ACTGGCCGCA GCCCAGCCCC CCACCGGCTG TGCCAGCTGG GCCGCAGATG GACCACATGG
181GGAACAGCTC CCAGGGGGCC CCCTGGCTCT TCCTCACCTC CGCACTGGCC CGAGGCGTCT
241CGGGGATCTT CGTGTGGACT GCCCTGGTGC TCACCTGCCA CCAGATCTAT CTGCACCTGC
301GCTCCTACAC CGTGCCACAG GAGCAACGTT ACATCATCCG CCTGCTCCTC ATCGTGCCCA
361TCTACGCCTT CGACTCCTGG CTCAGCCTCC TCCTCCTCGG AGACCACCAG TACTACGTCT
421ACTTCGACTC TGTGCGGGAC TGCTACGAAG CCTTTGTCAT TTACAGCTTC CTGAGCCTGT
481GTTTCCAGTA CCTGGGAGGC GAGGGCGCCA TCATGGCTGA GATTCGTGGA AAGCCCATCA
541AGTCCAGCTG CTTGTACGGC ACCTGCTGCC TCCGGGGCAT GACCTACTCC ATCGGGTTCC
601TGCGCTTCTG TAAGCAGGCC ACTCTGCAGT TCTGCCTGGT GAAGCCCGTC ATGGCCGTCA
661CCACCATCAT CCTCCAGGCA TTTGGCAAAT ACCACGACGG GGACTTCAAT GTCCGCAGCG
721GCTACCTCTA TGTGACCCTC ATCTACAACG CCTCCGTCAG CCTCGCCCTC TACGCCCTGT
781TCCTCTTCTA CTTCACCACC AGGGAGCTCC TGCGGCCCTT CCAGCCCGTC CTCAAGTTCC
841TCACCATCAA AGCCGTCATC TTCCTGTCGT TCTGGCAAGG GCTGCTGCTG GCCATCCTGG
901AGCGGTGCGG GGTCATCCCG GAGGTGGAGA CCAGCGGCGG GAACAAGCTG GGGGCTGGCA
961CGCTGGCCGC CGGCTACCAG AACTTCATCA TCTGCGTGGA GATGCTGTTC GCCTCCGTGG
1021CCCTGCGTTA TGCCTTCCCC TGCCAGGTGT ACGCAGAGAA GAAGGAGAAT TCACCAGCCC
1081CCCCGGCACC CATGCAGAGC ATCTCCAGCG GCATCAGGGA GACAGTGAGC CCCCAGGACA
1141TCGTGCAGGA CGCCATCCAC AACTTCTCCC CCGCCTACCA GCACTACACG CAGCAGGCCA
1201CGCACGAGGC GCCCAGGCCC GGCACCCACC CCGGCGGCGG CGGCTCCGGC GGGAGCAGGA
1261AGAGCCGGAG CCTGGAGAAG CGGATGCTGA TCCCCTCGGA GGACCTGTAC CCAACTTTCT
1321TGTACAAAGT tggcattata agaaagcatt gcttatcaat ttgttgcaac gaac

Download FASTA (ORF) (Full)