Construct: ORF ccsbBroadEn_14502

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017732.1_s300c1, BRDN0000456112
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MGC70870 (403340)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1488 CTBP2 C-terminal binding protein 2 XM_011539357.2 31.2% 27.5% (many diffs)
2 human 1488 CTBP2 C-terminal binding protein 2 XM_011539358.2 31.2% 27.5% (many diffs)
3 human 1488 CTBP2 C-terminal binding protein 2 XM_024447831.1 31.2% 27.5% (many diffs)
4 human 1488 CTBP2 C-terminal binding protein 2 NM_001083914.3 29.5% 26% (many diffs)
5 human 1488 CTBP2 C-terminal binding protein 2 NM_001290214.3 29.5% 26% (many diffs)
6 human 1488 CTBP2 C-terminal binding protein 2 NM_001290215.3 29.5% 26% (many diffs)
7 human 1488 CTBP2 C-terminal binding protein 2 NM_001321012.2 29.5% 26% (many diffs)
8 human 1488 CTBP2 C-terminal binding protein 2 NM_001321013.2 29.5% 26% (many diffs)
9 human 1488 CTBP2 C-terminal binding protein 2 NM_001321014.2 29.5% 26% (many diffs)
10 human 1488 CTBP2 C-terminal binding protein 2 NM_001329.4 29.5% 26% (many diffs)
11 human 1488 CTBP2 C-terminal binding protein 2 XM_005269561.3 29.5% 26% (many diffs)
12 human 1488 CTBP2 C-terminal binding protein 2 XM_005269564.3 29.5% 26% (many diffs)
13 human 1488 CTBP2 C-terminal binding protein 2 XM_005269567.3 29.5% 26% (many diffs)
14 human 1488 CTBP2 C-terminal binding protein 2 XM_005269568.5 29.5% 26% (many diffs)
15 human 1488 CTBP2 C-terminal binding protein 2 XM_005269569.3 29.5% 26% (many diffs)
16 human 1488 CTBP2 C-terminal binding protein 2 XM_005269571.3 29.5% 26% (many diffs)
17 human 1488 CTBP2 C-terminal binding protein 2 XM_005269572.4 29.5% 26% (many diffs)
18 human 1488 CTBP2 C-terminal binding protein 2 XM_006717642.3 29.5% 26% (many diffs)
19 human 1488 CTBP2 C-terminal binding protein 2 XM_011539351.2 29.5% 26% (many diffs)
20 human 1488 CTBP2 C-terminal binding protein 2 XM_011539353.2 29.5% 26% (many diffs)
21 human 1488 CTBP2 C-terminal binding protein 2 XM_011539354.2 29.5% 26% (many diffs)
22 human 1488 CTBP2 C-terminal binding protein 2 XM_011539355.2 29.5% 26% (many diffs)
23 human 1488 CTBP2 C-terminal binding protein 2 XM_017015756.2 29.5% 26% (many diffs)
24 human 1488 CTBP2 C-terminal binding protein 2 XM_017015757.2 29.5% 26% (many diffs)
25 human 1488 CTBP2 C-terminal binding protein 2 XM_024447830.1 29.5% 26% (many diffs)
26 human 1488 CTBP2 C-terminal binding protein 2 NM_001363508.2 25.6% 22.5% (many diffs)
27 human 403340 MGC70870 C-terminal binding protein ... NR_003682.1 13.9% (many diffs)
28 human 1488 CTBP2 C-terminal binding protein 2 NM_022802.3 13.3% 11.7% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
516
ORF length:
447
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaacttTG TACAAAAAAG
61TTGGCACCAT GCAGGAGATC CACGAGAAAG TTCTAAACGA AGTCGTGGGC GCCATGATGT
121ACCACAACTT CTCCCTCACC AGGGAGGACC TGGAAAATTT CAAGGCCCTG AGAGTGATCA
181TGCAGGTGGG CAGTGGCTAC GACAACGTGG CCATCAAGGC TGCTGGCGAG CTCGAAATTG
241CTCTGTGCAG CATCCCGTCC GCAGCCGTGG AAGAGACAGC CGACTCCACC ACCGGCCACA
301TCCTCAATCT GTACTGGGGG AACAGGTCAC TGTACCAGGC ACTGAGGGAA GGCACACGAG
361TTCACAGCGT GGAGCAGATT GGCGAGGTGG CCTCAGTAAA GGCCCGCATT CGTGGGGAGA
421TATTGGGCCT CATCGGCTTC GGTCGCACGC AGCAGGAGGT TGCAGTTAGA GCCAAGGCCT
481TTGCAGGATG GGATCGAGCG GTCCCTGGTG TGCATTGCCA ACTTTCTTGT ACAAAGTTGG
541cattataaga aagcattgct tatcaatttg ttgcaacgaa c

Download FASTA (ORF) (Full)