Construct: ORF ccsbBroadEn_14525

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF019053.1_s300c1, BRDN0000458671
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ABL1 (25)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 25 ABL1 ABL proto-oncogene 1, non-r... NM_005157.6 100% 100%
2 human 25 ABL1 ABL proto-oncogene 1, non-r... NM_007313.2 97.7% 96.5% (many diffs)
3 mouse 11350 Abl1 c-abl oncogene 1, non-recep... NM_009594.4 84.3% 87.7% (many diffs)
4 mouse 11350 Abl1 c-abl oncogene 1, non-recep... NM_001283045.1 83.1% 84.8% (many diffs)
5 mouse 11350 Abl1 c-abl oncogene 1, non-recep... NM_001283046.1 83% 85.3% (many diffs)
6 mouse 11350 Abl1 c-abl oncogene 1, non-recep... NM_001112703.2 82.5% 84.7% (many diffs)
7 mouse 11350 Abl1 c-abl oncogene 1, non-recep... NM_001283047.1 65.6% 67% (many diffs)
8 mouse 11350 Abl1 c-abl oncogene 1, non-recep... XM_006497621.3 44.3% 45.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
3459
ORF length:
3390
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcaccat gttggagatc tgcctgaagc tggtgggctg caaatccaag aaggggctgt
121cctcgtcctc cagctgttat ctggaagaag cccttcagcg gccagtagca tctgactttg
181agcctcaggg tctgagtgaa gccgctcgtt ggaactccaa ggaaaacctt ctcgctggac
241ccagtgaaaa tgaccccaac cttttcgttg cactgtatga ttttgtggcc agtggagata
301acactctaag cataactaaa ggtgaaaagc tccgggtctt aggctataat cacaatgggg
361aatggtgtga agcccaaacc aaaaatggcc aaggctgggt cccaagcaac tacatcacgc
421cagtcaacag tctggagaaa cactcctggt accatgggcc tgtgtcccgc aatgccgctg
481agtatctgct gagcagcggg atcaatggca gcttcttggt gcgtgagagt gagagcagtc
541ctggccagag gtccatctcg ctgagatacg aagggagggt gtaccattac aggatcaaca
601ctgcttctga tggcaagctc tacgtctcct ccgagagccg cttcaacacc ctggccgagt
661tggttcatca tcattcaacg gtggccgacg ggctcatcac cacgctccat tatccagccc
721caaagcgcaa caagcccact gtctatggtg tgtcccccaa ctacgacaag tgggagatgg
781aacgcacgga catcaccatg aagcacaagc tgggcggggg ccagtacggg gaggtgtacg
841agggcgtgtg gaagaaatac agcctgacgg tggccgtgaa gaccttgaag gaggacacca
901tggaggtgga agagttcttg aaagaagctg cagtcatgaa agagatcaaa caccctaacc
961tggtgcagct ccttggggtc tgcacccggg agcccccgtt ctatatcatc actgagttca
1021tgacctacgg gaacctcctg gactacctga gggagtgcaa ccggcaggag gtgaacgccg
1081tggtgctgct gtacatggcc actcagatct cgtcagccat ggagtacctg gagaagaaaa
1141acttcatcca cagagatctt gctgcccgaa actgcctggt aggggagaac cacttggtga
1201aggtagctga ttttggcctg agcaggttga tgacagggga cacctacaca gcccatgctg
1261gagccaagtt ccccatcaaa tggactgcac ccgagagcct ggcctacaac aagttctcca
1321tcaagtccga cgtctgggca tttggagtat tgctttggga aattgctacc tatggcatgt
1381ccccttaccc gggaattgac ctgtcccagg tgtatgagct gctagagaag gactaccgca
1441tggagcgccc agaaggctgc ccagagaagg tctatgaact catgcgagca tgttggcagt
1501ggaatccctc tgaccggccc tcctttgctg aaatccacca agcctttgaa acaatgttcc
1561aggaatccag tatctcagac gaagtggaaa aggagctggg gaaacaaggc gtccgtgggg
1621ctgtgagtac cttgctgcag gccccagagc tgcccaccaa gacgaggacc tccaggagag
1681ctgcagagca cagagacacc actgacgtgc ctgagatgcc tcactccaag ggccagggag
1741agagcgatcc tctggaccat gagcctgccg tgtctccatt gctccctcga aaagagcgag
1801gtcccccgga gggcggcctg aatgaagatg agcgccttct ccccaaagac aaaaagacca
1861acttgttcag cgccttgatc aagaagaaga agaagacagc cccaacccct cccaaacgca
1921gcagctcctt ccgggagatg gacggccagc cggagcgcag aggggccggc gaggaagagg
1981gccgagacat cagcaacggg gcactggctt tcaccccctt ggacacagct gacccagcca
2041agtccccaaa gcccagcaat ggggctgggg tccccaatgg agccctccgg gagtccgggg
2101gctcaggctt ccggtctccc cacctgtgga agaagtccag cacgctgacc agcagccgcc
2161tagccaccgg cgaggaggag ggcggtggca gctccagcaa gcgcttcctg cgctcttgct
2221ccgcctcctg cgttccccat ggggccaagg acacggagtg gaggtcagtc acgctgcctc
2281gggacttgca gtccacggga agacagtttg actcgtccac atttggaggg cacaaaagtg
2341agaagccggc tctgcctcgg aagagggcag gggagaacag gtctgaccag gtgacccgag
2401gcacagtaac gcctcccccc aggctggtga aaaagaatga ggaagctgct gatgaggtct
2461tcaaagacat catggagtcc agcccgggct ccagcccgcc caacctgact ccaaaacccc
2521tccggcggca ggtcaccgtg gcccctgcct cgggcctccc ccacaaggaa gaagctggaa
2581agggcagtgc cttagggacc cctgctgcag ctgagccagt gacccccacc agcaaagcag
2641gctcaggtgc accagggggc accagcaagg gccccgccga ggagtccaga gtgaggaggc
2701acaagcactc ctctgagtcg ccagggaggg acaaggggaa attgtccagg ctcaaacctg
2761ccccgccgcc cccaccagca gcctctgcag ggaaggctgg aggaaagccc tcgcagagcc
2821cgagccagga ggcggccggg gaggcagtcc tgggcgcaaa gacaaaagcc acgagtctgg
2881ttgatgctgt gaacagtgac gctgccaagc ccagccagcc gggagagggc ctcaaaaagc
2941ccgtgctccc ggccactcca aagccacagt ccgccaagcc gtcggggacc cccatcagcc
3001cagcccccgt tccctccacg ttgccatcag catcctcggc cctggcaggg gaccagccgt
3061cttccaccgc cttcatccct ctcatatcaa cccgagtgtc tcttcggaaa acccgccagc
3121ctccagagcg gatcgccagc ggcgccatca ccaagggcgt ggtcctggac agcaccgagg
3181cgctgtgcct cgccatctct aggaactccg agcagatggc cagccacagc gcagtgctgg
3241aggccggcaa aaacctctac acgttctgcg tgagctatgt ggattccatc cagcaaatga
3301ggaacaagtt tgccttccga gaggccatca acaaactgga gaataatctc cgggagcttc
3361agatctgccc ggcgacagca ggcagtggtc cagcggccac tcaggacttc agcaagctcc
3421tcagttcggt gaaggaaatc agtgacatag tgcagaggtt gccaactttc ttgtacaaag
3481ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)