Construct: ORF ccsbBroadEn_14604

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016837.2_s300c1, BRDN0000458410
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CSNK2A1 (1457)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 1457 CSNK2A1 casein kinase 2 alpha 1 NM_001362770.2 100% 100%
2 human 1457 CSNK2A1 casein kinase 2 alpha 1 NM_001362771.2 100% 100%
3 human 1457 CSNK2A1 casein kinase 2 alpha 1 NM_001895.4 100% 100%
4 human 1457 CSNK2A1 casein kinase 2 alpha 1 NM_177559.3 100% 100%
5 human 283106 CSNK2A3 casein kinase 2 alpha 3 NM_001256686.2 99.3% 98.4% (many diffs)
6 human 1457 CSNK2A1 casein kinase 2 alpha 1 NM_177560.3 65.2% 65.2% 0_1ins408
7 mouse 12995 Csnk2a1 casein kinase 2, alpha 1 po... NM_007788.3 94.5% 98.7% (many diffs)
8 mouse 12995 Csnk2a1 casein kinase 2, alpha 1 po... XM_006498657.4 94.5% 98.7% (many diffs)
9 mouse 12995 Csnk2a1 casein kinase 2, alpha 1 po... XM_011239272.3 94.5% 98.7% (many diffs)
10 mouse 12995 Csnk2a1 casein kinase 2, alpha 1 po... XM_030247074.1 94.5% 98.7% (many diffs)
11 mouse 12995 Csnk2a1 casein kinase 2, alpha 1 po... XM_030247075.1 94.5% 98.7% (many diffs)
12 mouse 12995 Csnk2a1 casein kinase 2, alpha 1 po... XM_030247076.1 94.5% 98.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1239
ORF length:
1173
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgtc gggacccgtg ccaagcaggg ccagagttta cacagatgtt aatacacaca
121gacctcgaga atactgggat tacgagtcac atgtggtgga atggggaaat caagatgact
181accagctggt tcgaaaatta ggccgaggta aatacagtga agtatttgaa gccatcaaca
241tcacaaataa tgaaaaagtt gttgttaaaa ttctcaagcc agtaaaaaag aagaaaatta
301agcgtgaaat aaagattttg gagaatttga gaggaggtcc caacatcatc acactggcag
361acattgtaaa agaccctgtg tcacgaaccc ccgccttggt ttttgaacac gtaaacaaca
421cagacttcaa gcaattgtac cagacgttaa cagactatga tattcgattt tacatgtatg
481agattctgaa ggccctggat tattgtcaca gcatgggaat tatgcacaga gatgtcaagc
541cccataatgt catgattgat catgagcaca gaaagctacg actaatagac tggggtttgg
601ctgagtttta tcatcctggc caagaatata atgtccgagt tgcttcccga tacttcaaag
661gtcctgagct acttgtagac tatcagatgt acgattatag tttggatatg tggagtttgg
721gttgtatgct ggcaagtatg atctttcgga aggagccatt tttccatgga catgacaatt
781atgatcagtt ggtgaggata gccaaggttc tggggacaga agatttatat gactatattg
841acaaatacaa cattgaatta gatccacgtt tcaatgatat cttgggcaga cactctcgaa
901agcgatggga acgctttgtc cacagtgaaa atcagcacct tgtcagccct gaggccttgg
961atttcctgga caaactgctg cgatatgacc accagtcacg gcttactgca agagaggcaa
1021tggagcaccc ctatttctac actgttgtga aggaccaggc tcgaatgggt tcatctagca
1081tgccaggggg cagtacgccc gtcagcagcg ccaatatgat gtcagggatt tcttcagtgc
1141caaccccttc accccttgga cctctggcag gctcaccagt gattgctgct gccaaccccc
1201ttgggatgcc tgttccagct gccgctggcg ctcagcagta cccaactttc ttgtacaaag
1261ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)