Construct: ORF ccsbBroadEn_14718

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018915.1_s300c1, BRDN0000458211
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
NPR2 (4882)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4882 NPR2 natriuretic peptide receptor 2 NM_003995.3 93.7% 19.6% (many diffs)
2 human 4882 NPR2 natriuretic peptide receptor 2 XM_005251478.3 93.4% 19.6% (many diffs)
3 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447557.1 89.2% 18.7% (many diffs)
4 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447556.1 88.9% 18.7% (many diffs)
5 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447558.1 59.4% 3.5% (many diffs)
6 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447561.1 49.3% 4.5% (many diffs)
7 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447560.1 46.9% 4.2% (many diffs)
8 human 4882 NPR2 natriuretic peptide receptor 2 XM_024447559.1 46.8% 4.2% (many diffs)
9 mouse 230103 Npr2 natriuretic peptide receptor 2 NM_173788.4 86.7% 19.2% (many diffs)
10 mouse 230103 Npr2 natriuretic peptide receptor 2 NM_001355466.1 84.3% 19.6% (many diffs)
11 mouse 230103 Npr2 natriuretic peptide receptor 2 XR_390318.4 41.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
98
ORF end:
797
ORF length:
699
Sequence:
1GATGATTTTA TTTTGACTGA TAGTGACCTG TTCGTTGCAA CAAATTGATG AGCAATGCTT
61TTTTATAATG CCAACTTTGT ACAAAAAAGT TGGCACCATG GCGCTGCCAT CACTTCTGCT
121GTTGGTGGCA GCCCTGGCAG GTGGGGTGCG TCCTCCCGGG GCGCGGAACC TGACGCTGGC
181GGTGGTGCTG CCAGAACACA ACCTGAGCTA TGCCTGGGCC TGGCCACGGG TGGGACCCGC
241TGTGGCACTA GCTGTGGAGG CTCTGGGCCG GGCACTGCCC GTGGACCTGC GGTTTGTCAG
301CTCCGAACTG GAAGGCGCCT GCTCTGAGTA CCTGGCACCG CTGAGCGCTG TGGACCTCAA
361GCTGTACCAT GACCCCGACC TGCTGTTAGG TCCCGGTTGC GTGTACCCTG CTGCCTCTGT
421GGCCCGCTTT GCCTCCCACT GGCGCCTTCC CCTGCTGACT GCGGGTGCTG TGGCCTCTGG
481TTTTTCGGCT AAGAATGACC ATTATCGTAC CCTGGTTCGC ACTGGCCCCT CTGCTCCCAA
541GCTGGGTGAG TTTGTGGTGA CACTACACGG GCACTTCAAT TGGACTGCCC GTGCTGCCTT
601GCTGTACCTG GATGCTCGCA CAGATGACCG GCCTCACTAC TTCACCATCG AGGGCGTCTT
661TGAGGCCCTG CAGGGCAGCA ACCTCAGTGT GCAGCACCAG TGTATGCCCG AGAGCCAGGG
721GCCCCGAGCA GGCCACCCAC TTCATCCGGG CCAACGGGCG CATTGTGTAT ATCTGCGGCC
781CTCTGGAGAT GCTGCATGAG ATCCTGCTTC AGCCCAGAGG GAGAATCTGA CCAATGGGGA
841TTATGTTCTT CTTTTACCTG GATGTCTTTG GGGAGAGTCT CCGTGCAGGC CCCACCACGT
901GCTAACAGGC CGGCCCtggc aggacaatcg cacccgggaa caggcccagg ccctcagaga
961ggcctttcag actgtattgg tgatcacgta ccgagaaccc ccaaatcctg agtatcagga
1021attccagaat cgtctgctga taagagcccg ggaagacttt ggtgtggagc tgggcccttc
1081cctgatgaac ctcatcgctg gctgcttcta tgatgggatc ctgctatatg ctgaagtcct
1141gaatgagaca atacaggaag gaggcacccg ggaggatgga cttcgaattg tggaaaagat
1201gcagggacga agatatcacg gtgtaactgg gctggttgtc atggacaaga acaatgaccg
1261agagactgac tttgtcctct gggccatggg agacctggat tctggggact ttcagcctgc
1321agcccactac tcgggagctg agaagcagat ttggtggacg ggacggccta ttccctgggt
1381gaagggggct cctccctcgg acaatccccc ctgtgccttt gacttggacg acccatcctg
1441tgataaaact ccactttcaa ccctggcaat tgtggctctg ggcacaggaa tcaccttcat
1501catgtttggt gtttccagct tcctaatttt ccgaaagctg atgctggaga aggagctggc
1561tagcatgttg tggcgtattc gctgggaaga actgcagttt ggcaactcag agcgttatca
1621caaaggtgca ggcagtcgcc tcacactgtc gctgcgggga tccagttacg gctcgctcat
1681gacagcccat gggaaatacc agatctttgc caacaccggt cacttcaagg gaaatgttgt
1741cgccatcaaa catgtgaata agaagcgcat tgagctgacc cggcaggttc tgtttgaact
1801caaacatatg agagatgttc agttcaacca tctcactcgc ttcattggcg cctgcataga
1861ccctcccaac atttgcattg tcactgaata ctgtcctcgt gggagtttac aggatattct
1921agaaaatgac agcatcaact tggactggat gtttcgttat tcactcatta atgaccttgt
1981taagggcatg gcctttctcc acaacagcat tatttcatcg catgggagtc tcaagtcctc
2041caactgtgtg gtggatagtc gttttgtgct caaaatcaca gactatggcc tggccagctt
2101ccgatcaact gctgaacctg atgacagcca tgccctctat gccaagaagc tgtggactgc
2161cccagaactg ctcagtggga accccttgcc aaccacaggc atgcagaagg ctgacgtcta
2221tagctttggg atcatcctgc aggagatagc acttcgcagt ggtcctttct acttggaggg
2281cctggacctc agccccaaag aGATGTTCCA GAAGGTACGC AAATGGTCAG CGGTCCCTAT
2341TTCCGGGGCA AGCATCGACC GGACCCAACC TCATGGAAGA GCATGTTCTG TGATCGAGTC
2401GATGTTAGAC TCAGACCGCA GATGAGCGAC CAGACTTTGG ACAGATTAAG CGCTTCATTC
2461GGCGTCTGAA CTAGCAGGTT GGCACCCGCA TAGTGGACAA CCTCCTGCTG CGCATGGAAC
2521AGTATCCCAA TAACTCGGAG AAGATGGTGG AGGTACGCAC ACAGGCCTAT CTGGAGGAAA
2581CACGCAAGGC TGAAGCTCTC CTCTACCAAC TCCTACCCCA TTCAGTGGCA GAGCAGTTAA
2641CACGGGGAGA GACTGTACAG GCTGAGGCCT TTGACACTGT TACCATCTAC TTCAGTGACA
2701TTGTCTGGCT TCACAGCATC GTCAGCAGAG AGCACCCCCA TGCAGGTACT GACACTTCTT
2761AATGACCTGT ATACCTCCTT TGATGCCATA ATTGACAACT TTGATGTCTA CAAGTCTCCA
2821CCTTTCCCAG ACTCTCCCAA CCTGTTTCTT CTCAAAGGGC CAGTCTGTGC TGGGGTTGTT
2881GGCCTGAAGA TGCCCCGTTA TTGTCTTTTT GGAGACACAG TGAACACTGC TTCTCGAATG
2941GAGTCTAATG GTCAAGCGCT GAAGATCCAT GTCTCCTCTA CCACCAAGGA TGCCCTAGAT
3001GAGCTAGGAT GCTTCCAGCT AGAGCTTCGG GGGGATGTGG AAATGAAGGG AAAAGGAAAG
3061ATGCGAACAT ACTGGCTCTT AGGAGAGCGG AAAGGACCTC CTGGACTCCT GTTGCCAACT
3121TTCTTGTACA AAGTTGGCAT TATAAGAAAG CATTGCTTAT CAATTTGTTG CAACGAACAG
3181GTCACTATCA GTCAAAATAA AATCATTATT GCCATCCCAG CTTGATTT

Download FASTA (ORF) (Full)

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