Construct: ORF ccsbBroadEn_14893

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016601.2_s300c1, BRDN0000458327
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
STK24 (8428)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8428 STK24 serine/threonine kinase 24 NM_001032296.3 100% 100%
2 human 8428 STK24 serine/threonine kinase 24 NM_003576.4 96% 95% (many diffs)
3 human 8428 STK24 serine/threonine kinase 24 NM_001286649.1 95.5% 95.5% 273_274ins57
4 human 8428 STK24 serine/threonine kinase 24 XM_017020794.2 82.6% 81.6% (many diffs)
5 human 8428 STK24 serine/threonine kinase 24 XM_005254079.5 77.1% 77.2% 0_1ins294;774G>A
6 human 8428 STK24 serine/threonine kinase 24 XM_024449426.1 77.1% 77.2% 0_1ins294;774G>A
7 mouse 223255 Stk24 serine/threonine kinase 24 NM_145465.2 88.1% 97.6% (many diffs)
8 mouse 223255 Stk24 serine/threonine kinase 24 XM_011245043.2 86.1% 94.9% (many diffs)
9 mouse 223255 Stk24 serine/threonine kinase 24 XM_017315988.1 85% 92.1% (many diffs)
10 mouse 223255 Stk24 serine/threonine kinase 24 XM_006518918.1 67.6% 74.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1359
ORF length:
1293
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggc tcactccccg gtgcagtcgg gcctgcccgg catgcagaac ctaaaggcag
121acccagaaga gctttttaca aaactagaga aaattgggaa gggctccttt ggagaggtgt
181tcaaaggcat tgacaatcgg actcagaaag tggttgccat aaagatcatt gatctggaag
241aagctgaaga tgagatagag gacattcaac aagaaatcac agtgctgagt cagtgtgaca
301gtccatatgt aaccaaatat tatggatcct atctgaagga tacaaaatta tggataataa
361tggaatatct tggtggaggc tccgcactag atctattaga acctggccca ttagatgaaa
421cccagatcgc tactatatta agagaaatac tgaaaggact cgattatctc cattcggaga
481agaaaatcca cagagacatt aaagcggcca acgtcctgct gtctgagcat ggcgaggtga
541agctggcgga ctttggcgtg gctggccagc tgacagacac ccagatcaaa aggaacacct
601tcgtgggcac cccattctgg atggcacccg aggtcatcaa acagtcggcc tatgactcga
661aggcagacat ctggtccctg ggcataacag ctattgaact tgcaagaggg gaaccacctc
721attccgagct gcaccccatg aaagttttat tcctcattcc aaagaacaac ccaccgacgt
781tggaaggaaa ctacagtaaa cccctcaagg agtttgtgga ggcctgtttg aataaggagc
841cgagctttag acccactgct aaggagttat tgaagcacaa gtttatacta cgcaatgcaa
901agaaaacttc ctacttgacc gagctcatcg acaggtacaa gagatggaag gccgagcaga
961gccatgacga ctcgagctcc gaggattccg acgcggaaac agatggccaa gcctcggggg
1021gcagtgattc tggggactgg atcttcacaa tccgagaaaa agatcccaag aatctcgaga
1081atggagctct tcagccatcg gacttggaca gaaataagat gaaagacatc ccaaagaggc
1141ctttctctca gtgtttatct acaattattt ctcctctgtt tgcagagttg aaggagaaga
1201gccaggcgtg cggagggaac ttggggtcca ttgaagagct gcgaggggcc atctacctag
1261cggaggaggc gtgccctggc atctccgaca ccatggtggc ccagctcgtg cagcggctcc
1321agagatactc tctaagtggt ggaggaactt catcccactg cccaactttc ttgtacaaag
1381ttggcattat aagaaagcat tgcttatcaa tttgttgcaa cgaac

Download FASTA (ORF) (Full)