Construct: ORF ccsbBroadEn_15142

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018952.1_s300c1, BRDN0000458248
DNA Barcode:
None
Epitope Tag:
None
Notes:
Early stop codon detected

Originally Annotated References:

Gene:
WNK4 (65266)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 65266 WNK4 WNK lysine deficient protei... NM_032387.5 77.8% 8.8% (many diffs)
2 human 65266 WNK4 WNK lysine deficient protei... XM_017024962.1 74.6% 8.4% (many diffs)
3 human 65266 WNK4 WNK lysine deficient protei... NM_001321299.2 67.9% 4.7% (many diffs)
4 human 65266 WNK4 WNK lysine deficient protei... XM_017024966.1 64.8% 4.5% (many diffs)
5 human 5681 PSKH1 protein serine kinase H1 NM_006742.3 33.6% 5.6% 0_1ins319;1272_1273ins2185
6 mouse 244631 Pskh1 protein serine kinase H1 NM_173432.2 29.8% 3.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
477
ORF length:
408
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcaccat gttggcatcc ccggccacgg agaccaccgt cctcatgtcc cagactgagg
121ccgacctggc cctgcggccc ccgcctcctc ttggcaccgc ggggcagccc cgcctcgggc
181cccctcctcg ccgagcgcgc cgcttctccg ggaaggctga gccccggccg cgctcttctc
241gtctcagccg ccgtagctca gtcgacttgg ggctgctgag ctcttggtcc ctgccagcct
301cacccgctcc ggaccccccc gatcctccgg actccgctgg tcctggcccc gcgaggagcc
361caccgcctag ctccaaagaa ccccccgATG GGCTGTGGGA CAAGCAAGGT CCTTCCCGAG
421CCACCCAAGG ATGTCCAGCT GGATCTGGTC AAGAAGGTGG AGCCCTTCAG TGGCACTAAG
481AGTGACGTGT ACAAGCACTT CATCACAGAG GTGGACAGTG TTGGCCCTGT CAAAGCCGGG
541TTCCCAGCAG CAAGTCAGTA TGCACACCCC TGCCCCGGTC CCCCGACTGC TGGCCACACG
601GAGCCTCCCT CAGAACCACC ACGCAGGGCC AGGGTAGCTA AGTACAGGGC CAAGTTTGAC
661CCACGTGTTA CAGCTAAGTA TGACATCAAG GCCCTAATTG GCCGAGGCAG CTTCAGCCGA
721GTGGTACGTG TAGAGCACCG GGCAACCCGG CAGCCGTATG CCATCAAGAT GATTGAGACC
781AAGTACCGGG AGGGGCGGGA GGTGTGTGAG TCGGAGCTGC GTGTGCTGCG TCGGGTGCGT
841CATGCCAACA TCATCCAGCT GGTGGAGGTG TTCGAGACAC AGGAGCGGGT GTACATGGTG
901ATGGAGCTGG CCACTGGTGG AGAGCTCTTT GACCGCATCA TTGCCAAGGG CTCCTTCACC
961GAGCGTGACG CCACGCGGGT GCTGCAGATG GTGCTGGATG GCGTCCGGTA TCTGCATGCA
1021CTGGGCATCA CACACCGAGA CCTCAAACCT GAGAATCTGC TCTACTACCA TCCGGGCACT
1081GACTCCAAGA TCATCATCAC CGACTTCGGC CTGGCCAGTG CTCGCAAGAA GGGTGATGAC
1141TGCTTGATGA AGACCACCTG TGGCACGCCT GAGTACATTG CCCCAGAAGT CCTGGTCCGC
1201AAGCCATACA CCAACTCAGT GGACATGTGG GCGCTGGGCG TCATTGCCTA CATCCTACTC
1261AGTGGCACCA TGCCGTTTGA GGATGACAAC CGTACCCGGC TGTACCGGCA GATCCTCAGG
1321GGCAAGTACA GTTACTCTGG GGAGCCCTGG CCTAGTGTGT CCAACCTGGC CAAGGACTTC
1381ATTGACCGCC TGCTGACAGT GGACCCTGGA GCCCGTATGA CTGCACTGCA GGCCCTGAGG
1441CACCCGTGGG TGGTGAGCAT GGCTGCCTCT TCATCCATGA AGAACCTGCA CCGCTCCATA
1501TCCCAGAACC TCCTTAAACG TGCCTCCTCG CGCTGCCAGA GCACCAAATC TGCCCAGTCC
1561ACGCGTTCCA GCCGCTCCAC ACGCTCCAAT AAGTCACGCC GTGTGCGGGA ACGGGAGCTG
1621CGGGAGCTCA ACCTGCGCTA CCAGCAGCAA TACAATGGCT TGctgccatc cagcgaaagc
1681gtgagaagct gcgtaaagca agggaattgg aggcactccc accagagcca ggacctccac
1741cagcaactgt gcccatggcc cccggtcccc ccagtgtctt cccccctgag cctgaggagc
1801cagaggcaga ccagcaccag cccttccttt tccgccacgc cagctactca tctaccactt
1861cggattgcga gactgatggc tacctcagct cctccggctt cctggatgcc tcagaccctg
1921cccttcagcc ccctgggggg gtgccatcca gcctggctga gtcccatctc tgcctgccct
1981cggcttttgc cctatccatt ccacgttctg gccctggaag tgacttttcc cccggggaca
2041gctatgcctc agatgcagct tcaggcctta gcgatgtggg agaagggatg ggacaaatga
2101ggagaccccc agggaggaat ctccggcgca gaccccgatc ccggctgcgg gtcactagtg
2161tctcagacca gaatgacaga gtggttgagt gccagctaca gacccataac agcaagatgg
2221tgaccttccg atttgatctg gatggggaca gcccggaaga gattgcagct gccatggtat
2281ataacgagtt cattctgcct tcggagcgag atggatttct cagacggatt cgggagatta
2341tccagcgagt ggagaccctg ttgaagagag acactggccc catggaggct gctgaagaca
2401ccctaagccc ccaggaggag ccagcaccat tacctgccct gcccgtcccc ctcccagacc
2461catccaatga agagctccag agcagcacct ccctggagca caggagctgg acagccttct
2521ccacctcctc atcttctcct ggaactcctt tgtctcctgg aaacccattt tcccctggaa
2581cccccatttc cccaggtccc atcttcccca tcacttctcc cccatgtcat cccagcccct
2641ccccattctc ccccatttct tcccaggtct cctcaaatcc ctctccacac cccaccagct
2701ctccacttcc attctcctcc agcacacccg agtttccggt cccactctct cagtgtccct
2761ggagttctct ccccacgact tctccaccta cgttctctcc cacttgttct caggtcactc
2821ttagttcccc tttctttcct ccgtgcccct ccacttcttc cttcccctcc accacagcag
2881cccctctcct ttctctggct agtgccttct cactggctgt gatgactgtg gcccagtccc
2941tgctgtcccc ctcacctggg ctcctttccc agtctcctcc agcccctcct agtcccctcc
3001ctagcctgcc ccttccccct cccgttgctc ctggtggcca ggaaagccct tcacccCACA
3061CAGCTGAGGT GGAGAGTGAG GCCTCCACCA CCTCTGCTCG CCCCTCCCAG GGGAAGCAGG
3121CTGGCGCCCA TCTCTGAAGA GGGAAAGCCG CAGCTTGTGG GCGTTTCCAA GTGACTTCAT
3181CCAAGGAACT GGCTGAGCCT CTTCCTTGCA GCCAACATCC CCCACTCTCT CTGGTTCTCC
3241AAAACATTCA ACCCCTCAGC TCACTTCAGA GAGCTCAGAT ACAGAGGACA GTGCTGGAGG
3301CGGGCCAGAG ACCAGGGAAG CTCTGGCTGA GAGCGACCGT GCAGCTGAGG GTCTGGGGGC
3361TGGAGTTGAG GAGGAAGGAG ATGATGGGAA GGAACCCCAA GTTGGGGGCA GCCCCCAACC
3421CCTGAGCCAT CCCAGCCCAG TGTGGATGAA CTACTCCTAC AGCAGCCTGT GTTTGAGCAG
3481CGAGGAGTCA GAAAGCAGTG GGGAAGATGA GGAGTTCTGG GCTGAGCTGC AGAGTCTTCG
3541GCAGAAGCAC TTGTCAGAGG TGGAAACACT ACAGACACTA CAGAAAAAAG AAATTGAAGA
3601TTTGTACAGC CGGCTGGGGA AGCAGCCCCC ACCGGGTATT GTGGCCCCAG CTGCTATGCT
3661GTCCAGCCGC CAGCGCCGCC TCTCCAAGGG CAGCTTCCCC ACCTCCCGCC GCAACAGCCT
3721ACAGCGCTCT GAGCCCCCAG GCCCTGGCAT CATGCGAAGG AACTCTCTGA GTGGCAGCAG
3781CACCGGCTCC CAGGAGCAGC GGGCAAGCAA GGGGGTGACA TTCGCCGGGG ATGTTGGCAG
3841GATGTTGCCA ACTTTCTTGT ACAAAGTTGG CATTATAAGA AAGCATTGCT TATCAATATG
3901TTCAATGCCC AGGTCATTAT CAGTCAAAAT AAAATCATTA TAGCCATCCA GCTAACTCAG
3961G

Download FASTA (ORF) (Full)