Construct: ORF ccsbBroadEn_15296

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010801.2_s300c1, BRDN0000458451
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
STK32C (282974)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 282974 STK32C serine/threonine kinase 32C NM_001318879.1 99.9% 100% 852T>C
2 human 282974 STK32C serine/threonine kinase 32C XM_011539693.2 99.9% 100% 852T>C
3 human 282974 STK32C serine/threonine kinase 32C XM_011539694.1 99.9% 100% 852T>C
4 human 282974 STK32C serine/threonine kinase 32C XM_011539695.1 99.9% 100% 852T>C
5 human 282974 STK32C serine/threonine kinase 32C XM_011539696.1 99.9% 100% 852T>C
6 human 282974 STK32C serine/threonine kinase 32C XM_024447947.1 99.9% 100% 852T>C
7 human 282974 STK32C serine/threonine kinase 32C XM_024447948.1 99.9% 100% 852T>C
8 human 282974 STK32C serine/threonine kinase 32C XM_024447949.1 99.9% 100% 852T>C
9 human 282974 STK32C serine/threonine kinase 32C NM_173575.4 75.8% 75.9% 1_351del;1203T>C
10 human 282974 STK32C serine/threonine kinase 32C XM_011539690.2 75% 75.1% 1_366del;1218T>C
11 human 282974 STK32C serine/threonine kinase 32C NM_001318878.2 73.8% 73.9% 1_390del;1242T>C
12 human 282974 STK32C serine/threonine kinase 32C XM_011539688.1 73.1% 73.2% 1_405del;1257T>C
13 human 282974 STK32C serine/threonine kinase 32C NR_134911.1 58.4% (many diffs)
14 human 282974 STK32C serine/threonine kinase 32C XR_945687.2 56.6% (many diffs)
15 mouse 57740 Stk32c serine/threonine kinase 32C NM_001162540.1 87% 92.1% (many diffs)
16 mouse 57740 Stk32c serine/threonine kinase 32C XM_006536216.3 73.2% 77.5% (many diffs)
17 mouse 57740 Stk32c serine/threonine kinase 32C NM_021302.3 66% 69.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1173
ORF length:
1107
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgta cgccatgaag tacatgaaca agcagcagtg catcgagcgc gacgaggtcc
121gcaacgtctt ccgggagctg gagatcctgc aggagatcga gcacgtcttc ctggtgaacc
181tctggtactc cttccaggac gaggaggaca tgttcatggt cgtggacctg ctactgggcg
241gggacctgcg ctaccacctg cagcagaacg tgcagttctc cgaggacacg gtgaggctgt
301acatctgcga gatggcactg gctctggact acctgcgcgg ccagcacatc atccacagag
361atgtcaagcc tgacaacatt ctcctggatg agagaggaca tgcacacctg accgacttca
421acattgccac catcatcaag gacggggagc gggcgacggc attagcaggc accaagccgt
481acatggctcc ggagatcttc cactcttttg tcaacggcgg gaccggctac tccttcgagg
541tggactggtg gtcggtgggg gtgatggcct atgagctgct gcgaggatgg aggccctatg
601acatccactc cagcaacgcc gtggagtccc tggtgcagct gttcagcacc gtgagcgtcc
661agtatgtccc cacgtggtcc aaggagatgg tggccttgct gcggaagctc ctcactgtga
721accccgagca ccggctctcc agcctccagg acgtgcaggc agccccggcg ctggccggcg
781tgctgtggga ccacctgagc gagaagaggg tggagccggg cttcgtgccc aacaaaggcc
841gtctgcactg cgaccccacc tttgagctgg aggagatgat cctggagtcc aggcccctgc
901acaagaagaa gaagcgcctg gccaagaaca agtcccggga caacagcagg gacagctccc
961agtccgagaa tgactatctt caagactgcc tcgatgccat ccagcaagac ttcgtgattt
1021ttaacagaga aaagctgaag aggagccagg acctcccgag ggagcctctc cccgcccctg
1081agtccaggga tgctgcggag cctgtggagg acgaggcgga acgctccgcc ctgcccatgt
1141gcggccccat ttgcccctcg gccgggagcg gctacccaac tttcttgtac aaagttggca
1201ttataagaaa gcattgctta tcaatttgtt gcaacgaac

Download FASTA (ORF) (Full)