Construct: ORF ccsbBroadEn_15355

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013083.1_s300c1, BRDN0000395353
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANXA8L2 (244)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 728113 ANXA8L1 annexin A8 like 1 NM_001278924.2 100% 100%
2 human 728113 ANXA8L1 annexin A8 like 1 NM_001278923.2 77.2% 77.2% 111_112ins114;475_570del
3 human 653145 ANXA8 annexin A8 NM_001271702.1 75.1% 75% (many diffs)
4 human 728113 ANXA8L1 annexin A8 like 1 NM_001098845.3 65.2% 65.2% 111_112ins114;320_490del;646_741del
5 human 653145 ANXA8 annexin A8 NM_001040084.3 64.7% 64.6% (many diffs)
6 human 653145 ANXA8 annexin A8 XM_006717951.3 60.8% 60.9% (many diffs)
7 human 653145 ANXA8 annexin A8 XM_011540098.1 52% 51.9% (many diffs)
8 human 653145 ANXA8 annexin A8 NM_001271703.1 46.7% 46.5% (many diffs)
9 human 653145 ANXA8 annexin A8 XM_011540101.2 32.4% 30.4% (many diffs)
10 mouse 11752 Anxa8 annexin A8 NM_001281845.1 58.7% 57.6% (many diffs)
11 mouse 11752 Anxa8 annexin A8 NM_013473.4 57.3% 58.9% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
894
ORF length:
828
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatggc ctggtggaaa gcctggattg aacaggaggg tgtcacagtg aagagcagct
121cccacttcaa cccagaccct gatgcagaga ccctctacaa agccatgaag gggatcggtg
181tcgggtccca actgctcagc caccaagcag ctgccttcgc cttcccctcc tccgccctca
241ccagtgtgtc accctggggg cagcagggtc acttgtgctg taaccctgca gggaccaacg
301agcaggctat catcgatgtg ctcaccaaga gaagcaacac gcagcggcag cagatcgcca
361agtccttcaa ggctcagttc ggcaaggacc tcactgagac cttgaagtct gagctcagtg
421gcaagtttga gaggctcatt gtggccctta tgtatccgcc atacagatac gaagccaagg
481agctgcatga cgccatgaag ggcagcaggg atgatgtgag cagctttgtg gacccggcac
541tggccctcca agacgcacag gatctgtatg cggcaggcga gaagattcgt gggactgatg
601agatgaaatt catcaccatc ctgtgcacgc gcagtgccac tcacctgctg agagtgaaat
661gcacccaaaa cctccacagc tactttgcag agagactcta ctatgccatg aagggagcag
721ggacgcgtga tgggaccctg ataagaaaca tcgtttcaag gagcgagatt gacttaaatc
781ttatcaaatg tcacttcaag aagatgtacg gcaagaccct cagcagcatg atcatggaag
841acaccagcgg cgactacaag aacgccctgc tgagcctggt gggcagcgac ccctnnccaa
901ctttcttgta caaagttggc attataagaa agcattgctt atcaatttgt tgcaacgaac

Download FASTA (ORF) (Full)