Construct: ORF ccsbBroadEn_15368

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002872.1_s300c1, BRDN0000393463
DNA Barcode:
None
Epitope Tag:
None
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BID (637)

Vector Information:

Vector Backbone:
pDONR223
Pol II Cassette 1:
n/a
Pol II Cassette 2:
n/a
Selection Marker:
n/a
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 637 BID BH3 interacting domain deat... NM_001196.3 99.6% 99.4% 486C>A;528T>C
2 human 637 BID BH3 interacting domain deat... NM_001244567.1 99.6% 99.4% 486C>A;528T>C
3 human 637 BID BH3 interacting domain deat... NM_197966.2 80.6% 80.4% 1_138del;624C>A;666T>C
4 human 637 BID BH3 interacting domain deat... NM_001244569.1 50.4% 50.2% 0_1ins288;198C>A;240T>C
5 human 637 BID BH3 interacting domain deat... NM_001244570.1 50.4% 50.2% 0_1ins288;198C>A;240T>C
6 human 637 BID BH3 interacting domain deat... NM_001244572.1 50.4% 50.2% 0_1ins288;198C>A;240T>C
7 human 637 BID BH3 interacting domain deat... NM_197967.2 50.4% 50.2% 0_1ins288;198C>A;240T>C
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
651
ORF length:
585
Sequence:
1gttcgttgca acaaattgat gagcaatgct tttttataat gccaactttg tacaaaaaag
61ttggcatgga ctgtgaggtc aacaacggtt ccagcctcag ggatgagtgc atcacaaacc
121tactggtgtt tggcttcctc caaagctgtt ctgacaacag cttccgcaga gagctggacg
181cactgggcca cgagctgcca gtgctggctc cccagtggga gggctacgat gagctgcaga
241ctgatggcaa ccgcagcagc cactcccgct tgggaagaat agaggcagat tctgaaagtc
301aagaagacat catccggaat attgccaggc acctcgccca ggtcggggac agcatggacc
361gtagcatccc tccgggcctg gtgaacggcc tggccctgca gctcaggaac accagccggt
421cggaggagga ccggaacagg gacctggcca ctgccctgga gcagctgctg caggcctacc
481ctagagacat ggagaaggag aagaccatgc tggtgctggc cctgctgctg gccaagaagg
541tggccagtca aacgccgtcc ttgctccgtg atgtctttca cacaacagtg aactttatta
601accagaacct acgcacctac gtgaggagct tagccagaaa tgggatggac tnnccaactt
661tcttgtacaa agttggcatt ataagaaagc attgcttatc aatttgttgc aacgaac

Download FASTA (ORF) (Full)