Transcript: Human NM_000852.4

Homo sapiens glutathione S-transferase pi 1 (GSTP1), mRNA.

Source:
NCBI, updated 2019-09-10
Taxon:
Homo sapiens (human)
Gene:
GSTP1 (2950)
Length:
741
CDS:
33..665

Additional Resources:

NCBI RefSeq record:
NM_000852.4
NBCI Gene record:
GSTP1 (2950)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_000852.4, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000083777 ACTCAAAGCCTCCTGCCTATA pLKO.1 161 CDS 100% 10.800 7.560 N GSTP1 n/a
2 TRCN0000083773 CTGCAAATACATCTCCCTCAT pLKO.1 335 CDS 100% 4.050 2.835 N GSTP1 n/a
3 TRCN0000369861 CTGCTGATCCATGAGGTCCTA pLKO_005 510 CDS 100% 2.640 1.848 N GSTP1 n/a
4 TRCN0000083774 GCTGCAAATACATCTCCCTCA pLKO.1 334 CDS 100% 2.160 1.512 N GSTP1 n/a
5 TRCN0000310549 GCTGCAAATACATCTCCCTCA pLKO_005 334 CDS 100% 2.160 1.512 N GSTP1 n/a
6 TRCN0000083775 CCTCACCCTGTACCAGTCCAA pLKO.1 212 CDS 100% 0.880 0.616 N GSTP1 n/a
7 TRCN0000300087 CCTCACCCTGTACCAGTCCAA pLKO_005 212 CDS 100% 0.880 0.616 N GSTP1 n/a
8 TRCN0000083776 CGCTGACTACAACCTGCTGGA pLKO.1 485 CDS 100% 0.720 0.504 N GSTP1 n/a
9 TRCN0000300088 CGCTGACTACAACCTGCTGGA pLKO_005 485 CDS 100% 0.720 0.504 N GSTP1 n/a
10 TRCN0000303861 CCTGGTGGACATGGTGAATGA pLKO_005 296 CDS 100% 4.950 2.970 N GSTP1 n/a
11 TRCN0000369862 TCATTGTGGGAGACCAGATCT pLKO_005 460 CDS 100% 4.950 2.970 N GSTP1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_000852.4, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 ccsbBroadEn_06335 pDONR223 100% 99.6% 99.5% None 313A>G;555T>C n/a
2 ccsbBroad304_06335 pLX_304 0% 99.6% 99.5% V5 313A>G;555T>C n/a
3 TRCN0000473257 CCAGAGGACCTAGAGCAGGACAAC pLX_317 66.6% 99.6% 99.5% V5 313A>G;555T>C n/a
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