Transcript: Human NM_001185055.2

Homo sapiens adducin 2 (ADD2), transcript variant 6, mRNA.

Source:
NCBI, updated 2019-09-28
Taxon:
Homo sapiens (human)
Gene:
ADD2 (119)
Length:
3647
CDS:
302..2029

Additional Resources:

NCBI RefSeq record:
NM_001185055.2
NBCI Gene record:
ADD2 (119)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_001185055.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000155732 CCTATCAATGACCTCCACACA pLKO.1 689 CDS 100% 2.640 3.696 N ADD2 n/a
2 TRCN0000155197 GAGTGACACCTATGTCACGTT pLKO.1 805 CDS 100% 0.264 0.370 N ADD2 n/a
3 TRCN0000155731 CCTTACTTTGACCGCTTCTCA pLKO.1 404 CDS 100% 3.000 2.100 N ADD2 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_001185055.2, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 ccsbBroadEn_05774 pDONR223 100% 73.6% 72.7% None (many diffs) n/a
2 ccsbBroad304_05774 pLX_304 0% 73.6% 72.7% V5 (many diffs) n/a
3 TRCN0000479405 ATTTCCCCGTATGTGTGATTTTGA pLX_317 9.3% 73.6% 72.7% V5 (many diffs) n/a
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