Construct: ORF TRCN0000479405

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016756.1_s317c1
Derived from:
ccsbBroadEn_05774
DNA Barcode:
ATTTCCCCGTATGTGTGATTTTGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ADD2 (119)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000479405
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 119 ADD2 adducin 2 NM_001185054.1 99.9% 99.8% 1315A>G
2 human 119 ADD2 adducin 2 NM_001617.4 99.9% 99.8% 1315A>G
3 human 119 ADD2 adducin 2 XM_011532502.2 99.9% 99.8% 1315A>G
4 human 119 ADD2 adducin 2 NM_017488.4 81.3% 80.3% 1315A>G;1740_1825del;1929_1930ins335
5 human 119 ADD2 adducin 2 NM_017482.4 75.2% 74.3% (many diffs)
6 human 119 ADD2 adducin 2 NM_001185055.2 73.6% 72.7% (many diffs)
7 mouse 11519 Add2 adducin 2 (beta) NM_001271857.1 86.9% 92.1% (many diffs)
8 mouse 11519 Add2 adducin 2 (beta) NM_001271858.1 86.9% 92.1% (many diffs)
9 mouse 11519 Add2 adducin 2 (beta) NM_001271859.1 86.9% 92.1% (many diffs)
10 mouse 11519 Add2 adducin 2 (beta) NM_013458.5 86.9% 92.1% (many diffs)
11 mouse 11519 Add2 adducin 2 (beta) NM_001271860.1 67.2% 71.8% (many diffs)
12 mouse 11519 Add2 adducin 2 (beta) NM_001271861.1 67.2% 71.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2244
ORF length:
2178
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgag cgaagagacg gtccccgagg ctgcctcgcc gccgcccccg caggggcagc
121cttactttga ccgcttctca gaggacgacc ccgagtacat gcgccttcgc aaccgggcgg
181cggacctgcg gcaggacttc aacctgatgg agcagaagaa gcgcgtcacc atgatcctgc
241agagtccctc tttcagggag gagctggaag gcctcatcca ggagcagatg aagaagggga
301acaactcctc caacatctgg gccctgcgac agatcgcgga cttcatggcc agcacctccc
361acgcagtctt cccgacatct tccatgaatg tctccatgat gacgcctatc aatgacctcc
421acacagctga ctccctgaac ctggccaaag gggagcggct catgcggtgc aagatcagca
481gtgtctaccg actcctggac ctctatggct gggcccagct gagtgacacc tatgtcacgt
541tgagagtcag caaggagcag gaccacttcc tgatcagccc taagggagtt tcttgcagtg
601aagtcacagc gtccagcctg atcaaggtga acattctggg agaggtggtg gagaagggca
661gcagctgctt cccagtggac accacaggct tctgtctgca ctcggccatc tatgcagcga
721ggcccgacgt gcgctgcatc atccacctgc acacaccggc cacagcagcg gtgtcggcca
781tgaagtgggg cctcctgcct gtctcccaca atgccctgct ggtgggggac atggcctatt
841atgacttcaa tggggaaatg gagcaggaag ccgatcggat caacctgcag aagtgccttg
901gacccacctg caagatcctg gtgctaagaa accatggagt ggttgctctg ggtgacacgg
961tagaggaggc attttacaag atcttccacc tgcaggctgc atgtgagata caggtgtcgg
1021ctctgtccag tgccggggga gtggagaacc tcatcctcct ggagcaggag aagcaccggc
1081cccatgaggt gggctccgtg cagtgggccg ggagcacctt tgggcctatg cagaagagtc
1141ggctggggga gcatgagttt gaggccctca tgaggatgct ggacaacctg ggctacagaa
1201caggttacac gtatcgccac ccctttgttc aagagaaaac caaacacaaa agtgaggtgg
1261agattccagc cacggtcaca gccttcgtgt ttgaggagga cggtgccccg gtgcccgccc
1321tgcgacagca tgcccagaag cagcagaagg agaagacccg ctggctcaat acgcccaacg
1381cctacctgcg ggtcaatgtg gccgatgagg tccagaggag catgggcagc ccccgaccca
1441agaccacgtg gatgaaggct gacgaggtgg agaaatccag cagtggcatg ccgattcgca
1501tcgaaaaccc aaaccaattt gtgcctctct atactgaccc ccaggaagta ctggagatga
1561ggaacaagat tcgagaacaa aaccgacaag atgtgaagtc agcggggcct cagtcccagc
1621tcctggcgag cgtcattgcc gagaagagcc gaagcccgtc tacagagagc cagctgatgt
1681ccaagggaga cgaggatacc aaagacgatt cagaggagac ggtgcccaac cccttcagcc
1741aactcactga ccaggagttg gaggagtaca agaaagaggt ggagaggaag aaactagaac
1801ttgatggaga gaaagaaact gccccagaag agcctggctc acctgcaaag tctgcacctg
1861cttctccagt gcagagccca gcgaaggagg cagagacaaa gagcccttta gtctctcctt
1921ccaagtcttt agaggaaggt actaagaaga cagaaacaag caaagccgcc accacagagc
1981ccgaaacaac ccagccggaa ggggtggtgg tcaacgggag ggaggaggag cagacggcag
2041aggaaatccT CAGCAAAGGC CTGAGCCAGA TGACCACCAG TGCTGACACG GATGTTGATA
2101CCTCTAAGGA CAAAACCGAG TCGGTCACCA GCGGCCCCAT GTCCCCAGAG GGCTCACCTT
2161CCAAGTCTCC CTCAAAGAAG AAAAAGAAAT TCCGAACCCC CTCCTTCCTG AAAAAGAGCA
2221AAAAGAAGGA GAAAGTGGAG TCCTGCCCAA CTTTCTTGTA CAAAGTGGTT GATATCGGTA
2281AGCCTATCCC TAACCCTCTC CTCGGTCTCG ATTCTACGTA GTAATGAACT AGTCCGTAAC
2341TTGAAAGTAT TTCGATTTCT TGGCTTTATA TATCTTGTGG AAAGGACGAA TTTCCCCGTA
2401TGTGTGATTT TGAACGCGTT AAGTCgacaa tcaacctctg gattacaaaa tttgtgaaag
2461att

Download FASTA (ORF) (Full)