Transcript: Human NM_002192.4

Homo sapiens inhibin subunit beta A (INHBA), mRNA.

Source:
NCBI, updated 2019-09-28
Taxon:
Homo sapiens (human)
Gene:
INHBA (3624)
Length:
6046
CDS:
230..1510

Additional Resources:

NCBI RefSeq record:
NM_002192.4
NBCI Gene record:
INHBA (3624)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Human NM_002192.4, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Human Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000376723 AGGCACTTTCCTACCCAATTA pLKO_005 1950 3UTR 100% 13.200 18.480 N INHBA n/a
2 TRCN0000370596 CCTCGGAGATCATCACGTTTG pLKO_005 588 CDS 100% 6.000 8.400 N INHBA n/a
3 TRCN0000059265 GCTTCTGAACGCGATCAGAAA pLKO.1 475 CDS 100% 0.495 0.693 N INHBA n/a
4 TRCN0000370664 GAGAATGGTGTACCCTTTATT pLKO_005 1762 3UTR 100% 15.000 12.000 N INHBA n/a
5 TRCN0000376722 AGACGCTGCACTTCGAGATTT pLKO_005 630 CDS 100% 13.200 9.240 N INHBA n/a
6 TRCN0000376721 GGCAGAAATGAATGAACTTAT pLKO_005 559 CDS 100% 13.200 9.240 N INHBA n/a
7 TRCN0000311429 TGGCAAGTTGCTGGATTATAG pLKO_005 261 CDS 100% 13.200 9.240 N Inhba n/a
8 TRCN0000376711 TGGCAAGTTGCTGGATTATAG pLKO_005 261 CDS 100% 13.200 9.240 N INHBA n/a
9 TRCN0000059267 CTCTGGCTATCATGCCAACTA pLKO.1 1255 CDS 100% 4.950 3.465 N INHBA n/a
10 TRCN0000059264 GAGACCCATGTCCATGTTGTA pLKO.1 1417 CDS 100% 4.950 3.465 N INHBA n/a
11 TRCN0000059263 GCTGGATTATAGTGAGGAGTT pLKO.1 270 CDS 100% 4.050 2.835 N INHBA n/a
12 TRCN0000059266 GCTGCACTTCGAGATTTCCAA pLKO.1 634 CDS 100% 3.000 2.100 N INHBA n/a
13 TRCN0000370662 TCAACATCTGCTGTAAGAAAC pLKO_005 1182 CDS 100% 10.800 6.480 N INHBA n/a
14 TRCN0000365463 TGGAGATAGAGGATGACATTG pLKO_005 531 CDS 100% 10.800 6.480 N INHBA n/a
15 TRCN0000067740 CCTTCCACTCAACAGTCATTA pLKO.1 1329 CDS 100% 13.200 9.240 N Inhba n/a
16 TRCN0000324943 CCTTCCACTCAACAGTCATTA pLKO_005 1329 CDS 100% 13.200 9.240 N Inhba n/a
17 TRCN0000166364 CACACACACACACACACACAA pLKO.1 2024 3UTR 100% 4.950 2.475 Y KAAG1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_002192.4, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

Clone ID DNA Barcode Vector Sequenced %[?] Nuc. Match %[?] Prot. Match %[?] Epitope Tag Match Diffs[?] Addgene[?]
1 ccsbBroadEn_00871 pDONR223 100% 100% 100% None n/a
2 ccsbBroad304_00871 pLX_304 0% 100% 100% V5 n/a
3 TRCN0000466688 TGTTTTCTAGACTCATTACGACCA pLX_317 25.5% 100% 100% V5 n/a
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