Transcript: Mouse NM_010855.3

Mus musculus myosin, heavy polypeptide 4, skeletal muscle (Myh4), mRNA.

Source:
NCBI, updated 2017-06-03
Taxon:
Mus musculus (mouse)
Gene:
Myh4 (17884)
Length:
6037
CDS:
111..5930

Additional Resources:

NCBI RefSeq record:
NM_010855.3
NBCI Gene record:
Myh4 (17884)

sgRNA constructs matching this transcript (CRISPRko, NGG PAM)

This list includes CRISPRko constructs with 100% (20mer + NGG) sequence match to the coding regions of this transcript.

No results found.

shRNA constructs matching this transcript with 100% SDR[?] match

This list includes all shRNAs that have a perfect SDR[?] match to Mouse NM_010855.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon).

Clone ID Target Seq Vector Match Position Match Region[?] SDR Match %[?] Intrinsic Score[?] Adjusted Score[?] Matches Other Mouse Gene?[?] Orig. Target Gene[?] Addgene[?]
1 TRCN0000109311 GTGGACAAACTACAGACTAAA pLKO.1 5724 CDS 100% 13.200 18.480 N Myh4 n/a
2 TRCN0000109312 CCTTGAACATGAAGAAGGTAA pLKO.1 4772 CDS 100% 4.950 3.465 N Myh4 n/a
3 TRCN0000109310 GCCTGATCAATGAACTGTCAA pLKO.1 3925 CDS 100% 4.950 3.465 N Myh4 n/a
4 TRCN0000109314 TCTGGCTAAGTCAGAGGCAAA pLKO.1 2708 CDS 100% 4.050 2.835 N Myh4 n/a
5 TRCN0000163202 GCCCTGGATGAAGCTGTATTT pLKO.1 2603 CDS 100% 13.200 6.600 Y MYH1 n/a
6 TRCN0000109313 CCTCCCAAGTACGACAAGATT pLKO.1 354 CDS 100% 5.625 2.813 Y Myh4 n/a
7 TRCN0000179778 GCAGACTTCAAGCAGAGATAT pLKO.1 2268 CDS 100% 13.200 6.600 Y Myh1 n/a
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shRNA constructs with at least a near match to this transcript

This list includes shRNAs that have at least a >84% (16 of 19 bases) SDR[?] match to the transcript NM_010855.3, regardless of what transcript they were originally designed to target. For example, this list can include shRNAs that were originally designed to target: (i) a different isoform or obsolete version of this transcript (as annotated by NCBI), (ii) a transcript of an orthologous gene (in this collection, generally human-to-mouse or mouse-to-human), or (iii) a transcript of a different gene (from the same or different taxon). NOTE: this download is a superset of the above result set.

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All ORF constructs matching this transcript

No results found.