Construct: ORF TRCN0000465231

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017838.2_s317c1
Derived from:
ccsbBroadEn_01156
DNA Barcode:
TTTGATACAAACCTCAAATCAGCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CDK17 (5128)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000465231
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5128 CDK17 cyclin dependent kinase 17 NM_002595.5 100% 100%
2 human 5128 CDK17 cyclin dependent kinase 17 XM_017019405.1 100% 100%
3 human 5128 CDK17 cyclin dependent kinase 17 XM_017019406.1 100% 100%
4 human 5128 CDK17 cyclin dependent kinase 17 NM_001170464.3 97.9% 96.4% (many diffs)
5 human 5128 CDK17 cyclin dependent kinase 17 XM_017019407.2 95.9% 95.9% 809_810ins63
6 mouse 237459 Cdk17 cyclin-dependent kinase 17 NM_146239.2 90.5% 98.6% (many diffs)
7 mouse 237459 Cdk17 cyclin-dependent kinase 17 XM_006513627.2 90.5% 98.6% (many diffs)
8 mouse 237459 Cdk17 cyclin-dependent kinase 17 XM_011243447.2 90.5% 98.6% (many diffs)
9 mouse 237459 Cdk17 cyclin-dependent kinase 17 XM_011243446.2 88.3% 96.3% (many diffs)
10 mouse 237459 Cdk17 cyclin-dependent kinase 17 XM_006513626.2 87.8% 95.7% (many diffs)
11 mouse 237459 Cdk17 cyclin-dependent kinase 17 XR_380395.3 64.7% (many diffs)
12 mouse 237459 Cdk17 cyclin-dependent kinase 17 XR_380396.3 28.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1635
ORF length:
1569
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa aaaatttaag agaaggctat ccctcacact ccgaggaagt cagactattg
121atgaatcatt gtctgaattg gctgaacaaa tgactattga agaaaacagc agcaaggata
181atgagcctat tgtgaagaat ggcaggcctc caacgtctca cagtatgcat tccttcctcc
241accagtacac aggatctttc aagaagcccc cattgcggag accacacagt gttattggag
301ggagccttgg ctccttcatg gcaatgccca gaaatggaag cagattagat attgttcatg
361aaaatctaaa aatgggatca gatggtgaga gtgaccaagc ttctgggaca tcatctgatg
421aagtccagtc acctacaggt gtttgtctca gaaatcgtat acatagacgg atctcaatgg
481aggatttaaa taagcggtta tcactgcctg cagacatcag aatacctgat ggatatcttg
541aaaagttgca gataaacagt ccaccatttg accaaccaat gagtcgaagg tctcgtagag
601cttccttatc agaaattggc tttggaaaaa tggaaaccta catcaaattg gaaaagcttg
661gagagggtac atatgcaaca gtatataaag gaagaagtaa attgacagag aatttggtgg
721cattaaaaga gatccgattg gaacatgaag aaggtgcacc ctgcacagct ataagagaag
781tttcactatt aaaggattta aaacatgcaa atatagtaac cttacatgac attgttcaca
841cagataaatc cttgactttg gtgtttgagt atctggataa agacctgaaa cagtacatgg
901atgactgtgg aaacatcatg agtatgcaca acgtaaagct gtttctgtac caaattctac
961gtggtttggc atattgccat agaagaaagg tattgcatcg agacttgaaa ccacagaacc
1021tcctcattaa tgagaaagga gaattaaagc tagcagattt tggactagcc cgagccaagt
1081cagttcccac aaagacctac tcaaatgaag ttgtcacact atggtaccgg ccacctgatg
1141tgcttcttgg ttcctcggag tactcaacac agattgacat gtggggtgtt ggttgcattt
1201tctttgaaat ggcttctgga agacctttat ttccaggatc aaccgtggaa gatgaactgc
1261acttaatttt ccgactgcta ggaactccat ctcaggaaac ttggccaggt atttcttcaa
1321atgaggagtt caagaactac aactttccaa aatataaacc acagcctcta attaaccacg
1381cacccaggtt agactctgaa ggaattgagt tgataacaaa atTTCTTCAG TATGAATCTA
1441AGAAAAGGGT TTCAGCTGAA GAGGCCATGA AACATGTGTA CTTTCGAAGT CTGGGACCAA
1501GAATACATGC TTTACCAGAA AGTGTATCAA TATTCAGTTT GAAAGAGATT CAGTTGCAAA
1561AGGACCCGGG TTTTCGAAAT TCTTCTTATC CAGAGACAGG ACATGGGAAG AACAGAAGAC
1621AGAGCATGCT CTTTTACCCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC
1681CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA
1741TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA TTTGATACAA ACCTCAAATC
1801AGCCACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)