Construct: ORF TRCN0000465267

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015749.1_s317c1
Derived from:
ccsbBroadEn_00645
DNA Barcode:
TGCACAATCACATTTAATCCTCGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GCLM (2730)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000465267
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 2730 GCLM glutamate-cysteine ligase m... NM_002061.4 100% 100%
2 human 2730 GCLM glutamate-cysteine ligase m... NM_001308253.1 91.9% 91.9% 125_126ins66
3 human 2730 GCLM glutamate-cysteine ligase m... XM_017001056.2 84.5% 81% (many diffs)
4 human 2730 GCLM glutamate-cysteine ligase m... XM_017001057.2 77% 73.2% (many diffs)
5 human 2730 GCLM glutamate-cysteine ligase m... XM_011541261.2 67.8% 67.8% 0_1ins264
6 mouse 14630 Gclm glutamate-cysteine ligase, ... NM_008129.4 91.3% 96.3% (many diffs)
7 mouse 14630 Gclm glutamate-cysteine ligase, ... XM_030252423.1 35.3% 32.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
888
ORF length:
822
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggg caccgacagc cgcgcggcca aggcgctcct ggcgcgggcc cgcaccctgc
121acctgcagac ggggaacctg ctgaactggg gccgcctgcg gaagaagtgc ccgtccacgc
181acagcgagga gcttcatgat tgtatccaaa aaaccttgaa tgaatggagt tcccaaatca
241acccagattt ggtcagggag tttccagatg tcttggaatg cactgtatct catgcagtag
301aaaagataaa tcctgatgaa agagaagaaa tgaaagtttc tgcaaaactg ttcattgtag
361aatcaaactc ttcatcatca actagaagtg cagttgacat ggcctgttca gtccttggag
421ttgcacagct ggattctgtg atcattgctt cacctcctat tgaagatgga gttaatcttt
481ccttggagca tttacagcct tactgggagg aattagaaaa cttagttcag agcaaaaaga
541ttgttgccat aggtacctct gatctagaca aaacacagtt ggaacagctg tatcagtggg
601cacaggtaaa accaaatagt aaccaagtta atcttgcctc ctgctgtgtg atgccaccag
661atttgactgc atttgctaaa caatttgaca tacagctgtt gactcacaat gatccaaaag
721aactgctttc tgaagcaagt ttccaagaag ctcttcagga aagcattcct gacattcaag
781cgcacgagtg ggtgccgctg tggctactgc ggtattcggt cattgtgaaa agtagaggaa
841ttatcaaatc aaaaggctac attttacaag ctaaaagaag gggttcTTAC CCAACTTTCT
901TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
961CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
1021GTGGAAAGGA CGATGCACAA TCACATTTAA TCCTCGTACG CGTTAAGTCg acaatcaacc
1081tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)