Construct: ORF TRCN0000466011

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF000922.1_s317c1
Derived from:
ccsbBroadEn_04195
DNA Barcode:
GTCTACCCGGTGCTCGGTATTGGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CEP63 (80254)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466011
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80254 CEP63 centrosomal protein 63 NM_001042383.2 100% 100%
2 human 80254 CEP63 centrosomal protein 63 NM_001353119.1 100% 100%
3 human 80254 CEP63 centrosomal protein 63 NM_001353120.1 100% 100%
4 human 80254 CEP63 centrosomal protein 63 NM_001353121.1 100% 100%
5 human 80254 CEP63 centrosomal protein 63 NM_001353122.1 100% 100%
6 human 80254 CEP63 centrosomal protein 63 NM_001353118.1 97.6% 95.6% 1_31del;70_71insGGTG
7 human 80254 CEP63 centrosomal protein 63 NM_001353125.1 94.3% 94.3% 0_1ins84
8 human 80254 CEP63 centrosomal protein 63 XM_024453778.1 94.3% 94.3% 0_1ins84
9 human 80254 CEP63 centrosomal protein 63 NM_001042384.2 91.9% 89.4% (many diffs)
10 human 80254 CEP63 centrosomal protein 63 NM_001353123.1 91.9% 89.4% (many diffs)
11 human 80254 CEP63 centrosomal protein 63 NM_001353124.1 91.9% 89.4% (many diffs)
12 human 80254 CEP63 centrosomal protein 63 NM_001042400.2 91.4% 91.4% 928_1065del
13 human 80254 CEP63 centrosomal protein 63 NM_001353110.1 91.4% 91.4% 928_1065del
14 human 80254 CEP63 centrosomal protein 63 NM_001353111.1 91.4% 91.4% 928_1065del
15 human 80254 CEP63 centrosomal protein 63 NM_001353112.1 91.4% 91.4% 928_1065del
16 human 80254 CEP63 centrosomal protein 63 XM_024453776.1 89.6% 89.6% 1_33del;961_1098del
17 human 80254 CEP63 centrosomal protein 63 XM_024453779.1 86.3% 83.8% (many diffs)
18 human 80254 CEP63 centrosomal protein 63 XM_024453775.1 86.3% 86.3% 0_1ins84;844_981del
19 human 80254 CEP63 centrosomal protein 63 NM_001353113.1 84.2% 81.9% (many diffs)
20 human 80254 CEP63 centrosomal protein 63 NM_001353117.1 84.2% 81.9% (many diffs)
21 human 80254 CEP63 centrosomal protein 63 XR_002959589.1 81.7% (many diffs)
22 human 80254 CEP63 centrosomal protein 63 XM_024453777.1 79.1% 76.7% (many diffs)
23 human 80254 CEP63 centrosomal protein 63 XM_024453774.1 76.1% 72.4% (many diffs)
24 human 80254 CEP63 centrosomal protein 63 XR_001740278.1 75.7% (many diffs)
25 human 80254 CEP63 centrosomal protein 63 NM_001353126.1 75.5% 75.5% 0_1ins363
26 human 80254 CEP63 centrosomal protein 63 NM_001353109.1 75.3% 75.3% 1329_1814del
27 human 80254 CEP63 centrosomal protein 63 XM_017007247.2 75.3% 75.3% 1329_1814del
28 human 80254 CEP63 centrosomal protein 63 XM_017007248.2 75.3% 75.3% 1329_1814del
29 human 80254 CEP63 centrosomal protein 63 XM_017007249.1 75.3% 75.3% 1329_1814del
30 human 80254 CEP63 centrosomal protein 63 XR_002959590.1 72.8% (many diffs)
31 human 80254 CEP63 centrosomal protein 63 XM_024453770.1 71% 71% 0_1ins84;1245_1730del
32 human 80254 CEP63 centrosomal protein 63 XM_024453772.1 70.6% 67.1% (many diffs)
33 human 80254 CEP63 centrosomal protein 63 NM_001353108.2 70.4% 70.4% 928_1065del;1467_1952del
34 human 80254 CEP63 centrosomal protein 63 NM_025180.4 70.4% 70.4% 928_1065del;1467_1952del
35 human 80254 CEP63 centrosomal protein 63 XM_005247797.3 70.4% 70.4% 928_1065del;1467_1952del
36 human 80254 CEP63 centrosomal protein 63 XM_006713760.4 70.4% 70.4% 928_1065del;1467_1952del
37 human 80254 CEP63 centrosomal protein 63 XR_002959587.1 69.5% (many diffs)
38 human 80254 CEP63 centrosomal protein 63 XM_024453768.1 69.3% 69.3% 1_33del;961_1098del;1500_1985del
39 human 80254 CEP63 centrosomal protein 63 XM_005247795.5 69.2% 67.7% (many diffs)
40 human 80254 CEP63 centrosomal protein 63 XM_024453769.1 66.4% 66.4% 0_1ins84;844_981del;1383_1868del
41 human 80254 CEP63 centrosomal protein 63 XM_024453771.1 66.4% 66.4% 0_1ins84;844_981del;1383_1868del
42 human 80254 CEP63 centrosomal protein 63 XM_024453773.1 66.4% 66.4% 0_1ins84;844_981del;1383_1868del
43 human 80254 CEP63 centrosomal protein 63 XR_002959588.1 64.5% (many diffs)
44 human 80254 CEP63 centrosomal protein 63 XM_005247799.3 53.2% 53.2% 0_1ins363;565_702del;1104_1589del
45 human 80254 CEP63 centrosomal protein 63 XM_017007252.1 53.2% 53.2% 0_1ins363;565_702del;1104_1589del
46 human 80254 CEP63 centrosomal protein 63 XR_002959586.1 42.2% (many diffs)
47 human 80254 CEP63 centrosomal protein 63 NR_148355.1 27% 1_354del;1682_1837del;1996_5491del
48 human 80254 CEP63 centrosomal protein 63 NR_148354.1 26.8% 1_409del;1336_1469del;2029_5524del
49 human 80254 CEP63 centrosomal protein 63 NR_148353.1 26.7% 1_409del;1737_1892del;2051_5546del
50 human 80254 CEP63 centrosomal protein 63 NR_148352.1 26.1% 1_409del;1738_2017del;2175_5670del
51 mouse 28135 Cep63 centrosomal protein 63 XM_017313414.1 77.3% 78.8% (many diffs)
52 mouse 28135 Cep63 centrosomal protein 63 XM_017313415.1 71.1% 72.3% (many diffs)
53 mouse 28135 Cep63 centrosomal protein 63 XM_017313413.1 70.6% 72% (many diffs)
54 mouse 28135 Cep63 centrosomal protein 63 NM_001301689.1 69.7% 71.1% (many diffs)
55 mouse 28135 Cep63 centrosomal protein 63 XM_017313412.1 69.3% 70.7% (many diffs)
56 mouse 28135 Cep63 centrosomal protein 63 XM_017313411.1 69.2% 70.5% (many diffs)
57 mouse 28135 Cep63 centrosomal protein 63 XM_011242890.2 67.4% 68.7% (many diffs)
58 mouse 28135 Cep63 centrosomal protein 63 XM_006511745.3 59.7% 60.6% (many diffs)
59 mouse 28135 Cep63 centrosomal protein 63 XM_017313410.1 59.7% 60.6% (many diffs)
60 mouse 28135 Cep63 centrosomal protein 63 XM_006511744.3 58.4% 59.2% (many diffs)
61 mouse 28135 Cep63 centrosomal protein 63 XM_006511741.1 55.7% 56.5% (many diffs)
62 mouse 28135 Cep63 centrosomal protein 63 XM_011242885.2 55.6% 56.4% (many diffs)
63 mouse 28135 Cep63 centrosomal protein 63 NM_001081122.1 55.2% 55.9% (many diffs)
64 mouse 28135 Cep63 centrosomal protein 63 XM_006511747.3 55% 55.6% (many diffs)
65 mouse 28135 Cep63 centrosomal protein 63 XM_017313409.1 54.9% 55.7% (many diffs)
66 mouse 28135 Cep63 centrosomal protein 63 XM_011242884.1 54.8% 55.6% (many diffs)
67 mouse 28135 Cep63 centrosomal protein 63 XM_017313408.1 54.8% 55.6% (many diffs)
68 mouse 28135 Cep63 centrosomal protein 63 XM_011242883.1 54.5% 55.3% (many diffs)
69 mouse 28135 Cep63 centrosomal protein 63 XM_017313407.1 54.4% 55.2% (many diffs)
70 mouse 28135 Cep63 centrosomal protein 63 XM_011242882.1 54% 54.8% (many diffs)
71 mouse 28135 Cep63 centrosomal protein 63 XM_006511739.1 53.7% 54.5% (many diffs)
72 mouse 28135 Cep63 centrosomal protein 63 XM_017313406.1 53.7% 54.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1551
ORF length:
1485
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga ggctttgtta gaaggaatac aaaatcgagg gcatggtggg ggatttttga
121catcttgtga agcagaacta caggagctca tgaaacagat tgacataatg gtggctcata
181aaaaatctga atgggaagga cgtacacatg ctctagaaac ttgcttgaaa atccgtgaac
241aggaacttaa gagtcttagg agtcagttgg atgtgacaca taaggaggtt ggaatgttgc
301atcagcaggt agaagaacat gaaaaaatca agcaagagat gaccatggaa tataagcagg
361agttgaagaa actacatgaa gaattatgca tactgaagag aagctatgaa aagcttcaga
421aaaagcaaat gagggaattc agaggaaata ccaaaaatca cagggaagat cggtctgaaa
481ttgagaggtt aactgcaaaa atagaggaat tccgtcagaa atcgctggac tgggagaagc
541aacgcttgat ttatcagcaa caggtatctt cactggaggc acaaaggaag gctctggctg
601aacaatcaga gataattcag gctcagcttg tcaatcggaa acagaaatta gagtctgtgg
661aactttctag ccaatcagaa attcaacact taagcagtaa actggagcgg gctaatgaca
721ctatctgtgc caatgagttg gaaatagagc gcctcaccat gagggtcaat gacttggttg
781gaaccagtat gactgtccta caggagcagc agcaaaaaga agaaaaattg agggaatctg
841aaaaactatt agaggctctg caggaagaaa agagagaatt gaaggcagct cttcagtctc
901aagaaaatct catacatgag gccagaatac aaaaggagaa gttacaagaa aaagtaaagg
961caactaacac tcaacatgct gtagaagcta taagtttgga atctgtgagt gcaacgtgta
1021aacagctgag ccaagaacta atggaaaaat atgaagaact gaagaggatg gaagcacata
1081acaatgaata caaagcagag attaagaagt tgaaagaaca gattttacag ggtgaacaaa
1141gttacagttc tgcactagaa ggaatgaaga tggaaatctc ccatctaact caggagttac
1201atcagcgaga tatcactatt gcttccacca aaggttcttc cTCAGACATG GAAAAGCGAC
1261TCAGAGCAGA GATGCAAAAG GCAGAAGACA AAGCAGTAGA GCATAAGGAG ATTTTGGATC
1321AGCTGGAGTC ACTCAAATTA GAAAATCGTC ATCTTTCTGA AATGGTGATG AAATTGGAAT
1381TGGGTTTACA TGAGTGTTCC TTGCCTGTAT CTCCCCTTGG TTCAATAGCT ACCAGATTTT
1441TGGAAGAGGA GGAACTGAGG TCTCATCACA TTCTAGAGCG CTTGGATGCC CATATTGAAG
1501AACTAAAAAG AGAGAGTGAA AAGACAGTGA GACAATTCAC AGCCTTAAAG TACCCAACTT
1561TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1621CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1681CTTGTGGAAA GGACGAGTCT ACCCGGTGCT CGGTATTGGT ACGCGTTAAG TCgacaatca
1741acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)