Construct: ORF TRCN0000466305

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013046.2_s317c1
Derived from:
ccsbBroadEn_14999
DNA Barcode:
CGATAGACTCGCTCTCTATTGGCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ARSG (22901)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466305
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 22901 ARSG arylsulfatase G NM_001267727.1 100% 100%
2 human 22901 ARSG arylsulfatase G NM_001352899.1 100% 100%
3 human 22901 ARSG arylsulfatase G NM_001352900.2 100% 100%
4 human 22901 ARSG arylsulfatase G NM_001352901.2 100% 100%
5 human 22901 ARSG arylsulfatase G NM_001352902.2 100% 100%
6 human 22901 ARSG arylsulfatase G NM_014960.5 100% 100%
7 human 22901 ARSG arylsulfatase G XM_017024365.1 100% 100%
8 human 22901 ARSG arylsulfatase G NM_001352903.2 99.8% 99.8% 704_705insCAC
9 human 22901 ARSG arylsulfatase G NM_001352904.1 99.8% 99.8% 704_705insCAC
10 human 22901 ARSG arylsulfatase G NM_001352905.2 99.8% 99.8% 704_705insCAC
11 human 22901 ARSG arylsulfatase G NM_001352906.1 99.8% 99.8% 704_705insCAC
12 human 22901 ARSG arylsulfatase G NM_001352907.2 99.8% 99.8% 704_705insCAC
13 human 22901 ARSG arylsulfatase G XM_011524536.2 95.1% 95.1% 1212_1292del
14 human 22901 ARSG arylsulfatase G XM_011524537.1 95.1% 95.1% 1212_1292del
15 human 22901 ARSG arylsulfatase G XM_017024360.2 95.1% 95.1% 1212_1292del
16 human 22901 ARSG arylsulfatase G NM_001352910.2 85.9% 83.2% (many diffs)
17 human 22901 ARSG arylsulfatase G NM_001352909.2 82.8% 80.2% (many diffs)
18 human 22901 ARSG arylsulfatase G XM_017024368.1 78.6% 71.4% 1090_1091ins121;1239_1240ins215
19 human 22901 ARSG arylsulfatase G XM_024450658.1 65.3% 65.3% 0_1ins492;720_800del
20 human 22901 ARSG arylsulfatase G XM_011524546.2 50% 50% 0_1ins747;465_545del
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1641
ORF length:
1575
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatggg ctggcttttt ctaaaggttt tgttggcggg agtgagtttc tcaggatttc
121tttatcctct tgtggatttt tgcatcagtg ggaaaacaag aggacagaag ccaaactttg
181tgattatttt ggccgatgac atggggtggg gtgacctggg agcaaactgg gcagaaacaa
241aggacactgc caaccttgat aagatggctt cggagggaat gaggtttgtg gatttccatg
301cagctgcctc cacctgctca ccctcccggg cttccttgct caccggccgg cttggccttc
361gcaatggagt cacacgcaac tttgcagtca cttctgtggg aggccttccg ctcaacgaga
421ccaccttggc agaggtgctg cagcaggcgg gttacgtcac tgggataata ggcaaatggc
481atcttggaca ccacggctct tatcacccca acttccgtgg ttttgattac tactttggaa
541tcccatatag ccatgatatg ggctgtactg atactccagg ctacaaccac cctccttgtc
601cagcgtgtcc acagggtgat ggaccatcaa ggaaccttca aagagactgt tacactgacg
661tggccctccc tctttatgaa aacctcaaca ttgtggagca gccggtgaac ttgagcagcc
721ttgcccagaa gtatgctgag aaagcaaccc agttcatcca gcgtgcaagc accagcggga
781ggcccttcct gctctatgtg gctctggccc acatgcacgt gcccttacct gtgactcagc
841taccagcagc gccacggggc agaagcctgt atggtgcagg gctctgggag atggacagtc
901tggtgggcca gatcaaggac aaagttgacc acacagtgaa ggaaaacaca ttcctctggt
961ttacaggaga caatggcccg tgggctcaga agtgtgagct agcgggcagt gtgggtccct
1021tcactggatt ttggcaaact cgtcaagggg gaagtccagc caagcagacg acctgggaag
1081gagggcaccg ggtcccagca ctggcttact ggcctggcag agttccagtt aatgtcacca
1141gcactgcctt gttaagcgtg ctggacattt ttccaactgt ggtagccctg gcccaggcca
1201gcttacctca aggacggcgc tttgatggtg tggacgtctc cgaggtgctc tttggccggt
1261cacagcctgg gcacagggtg ctgttccacc ccaacagcgg ggcagctgga gagtttggag
1321ccctgcagac tgtccgcctg gagcgttaca aggCCTTCTA CATTACCGGT GGAGCCAGGG
1381CGTGTGATGG GAGCACGGGG CCTGAGCTGC AGCATAAGTT TCCTCTGATT TTCAACCTGG
1441AAGACGATAC CGCAGAAGCT GTGCCCCTAG AAAGAGGTGG TGCGGAGTAC CAGGCTGTGC
1501TGCCCGAGGT CAGAAAGGTT CTTGCAGACG TCCTCCAAGA CATTGCCAAC GACAACATCT
1561CCAGCGCAGA TTACACTCAG GACCCTTCAG TAACTCCCTG CTGTAATCCC TACCAAATTG
1621CCTGCCGCTG TCAAGCCGCA TACCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1681CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1741AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGACGAT AGACTCGCTC
1801TCTATTGGCC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)