Construct: ORF TRCN0000466520

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013168.1_s317c1
Derived from:
ccsbBroadEn_12610
DNA Barcode:
ATACGCACAAGGAAGCCATGCTGT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TTLL7 (79739)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466520
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 79739 TTLL7 tubulin tyrosine ligase like 7 XM_011542159.3 98% 97.2% (many diffs)
2 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737415.2 76.7% (many diffs)
3 human 79739 TTLL7 tubulin tyrosine ligase like 7 NM_001350214.2 60.9% 59.3% (many diffs)
4 human 79739 TTLL7 tubulin tyrosine ligase like 7 NM_024686.6 60.9% 59.3% (many diffs)
5 human 79739 TTLL7 tubulin tyrosine ligase like 7 NM_001350215.2 57.9% 56.2% (many diffs)
6 human 79739 TTLL7 tubulin tyrosine ligase like 7 XM_017002349.2 33.3% 31.9% (many diffs)
7 human 79739 TTLL7 tubulin tyrosine ligase like 7 XM_024449807.1 33.3% 31.9% (many diffs)
8 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737411.2 20.4% (many diffs)
9 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_946760.3 20.3% (many diffs)
10 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737413.2 20.3% (many diffs)
11 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737409.2 20.2% (many diffs)
12 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_946758.3 20.2% (many diffs)
13 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737412.2 20.2% (many diffs)
14 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737410.2 20.1% 1_292del;774C>G;1922_8065del
15 human 79739 TTLL7 tubulin tyrosine ligase like 7 XR_001737414.2 20.1% (many diffs)
16 mouse 70892 Ttll7 tubulin tyrosine ligase-lik... NM_001302958.1 78.2% 81.6% (many diffs)
17 mouse 70892 Ttll7 tubulin tyrosine ligase-lik... XM_017319722.1 54% 56.3% (many diffs)
18 mouse 70892 Ttll7 tubulin tyrosine ligase-lik... XM_006502088.3 53.7% 56% (many diffs)
19 mouse 70892 Ttll7 tubulin tyrosine ligase-lik... XM_017319721.1 52.5% 54.7% (many diffs)
20 mouse 70892 Ttll7 tubulin tyrosine ligase-lik... NM_001302957.1 52.3% 54.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1695
ORF length:
1629
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgcc atctctgcct caagaaggag ttattcaggg accctctccc ctggatttga
121atacagaatt accttatcaa agcacaatga aaaggaaagt cagaaagaag aaaaagaagg
181gaaccattac agcaaatgtt gccgggacaa agtttgaaat tgttcgttta gtaatagatg
241aaatgggatt tatgaaaact ccagatgagg atgaaacaag taatcttata tggtgtgatt
301ctgctgttca gcaggagaaa atttcagagc tgcaaaatta tcagaggatc aaccattttc
361caggaatggg ggagatctgt aggaaggatt tcttagcaag aaatatgacc aaaatgatca
421agtctcggcc tctggattat acctttgttc ctcgaacttg gatctttcct gctgaatata
481ctcaattcca aaattatgtg aaagaattga agaaaaaacg gaagcagaaa acttttatag
541tgaaacgagc taatggtgca atgggtcatg ggatttcttt gataagaaat ggtgacaaac
601ttccatctca ggatcatttg attgttcaag aatacattga aaagcctttc ctaatggaag
661gttacaagtt tgacttacga atttatattc tggttacatc gtgtgatcca ctaaaaatat
721ttctctacca tgatgggctt gtgcgaatgg gtacagagaa gtacattcca cctaatgagt
781ccaatttgac ccagttatac atgcatctga caaactactc cgtgaacaag cataatgagc
841attttgaacg ggatgaaact gagaacaaag gcagcaaacg ttccatcaaa tggtttacag
901aattccttca agcaaatcaa catgatgttg ctaagttttg gagtgatatt tcagaattgg
961tggtaaagac cctgattgta gcagaacctc atgtcctgca tgcctatcga atgtgtagac
1021ctggtcaacc tccaggaagc gaaagtgtct gctttgaagt cctgggattt gatattttgt
1081tggatagaaa actaaagcca tggcttctgg agattaaccg agccccaagc tttggaactg
1141atcagaaaat agactatgat gtaaaaaggg gagtgctgct aaatgcgttg aagctactaa
1201acataaggac cagtgacaaa agaagaaact tggccaaaca aaaagctgag gctcaaagga
1261ggctctatgg tcaaaattca attaaaaggc tcttaccagg ctcctcagac tgggaacagc
1321agagacacca gttGGAGAGG CGGAAAGAAG AGTTGAAAGA GAGACTCGCT CAAGTACGAA
1381AGCAGATCTC ACGAGAAGAA CATGAAAATC GACATATGGG GAATTATAGA CGAATTTATC
1441CTCCTGAAGA TAAAGCATTA CTTGAAAAGT ATGAAAATTT GTTAGCTGTT GCCTTTCAGA
1501CCTTCCTTTC AGGAAGAGCA GCTTCATTCC AGCGAGAGTT GAATAATCCT TTGAAAAGGA
1561TGAAGGAAGA AGATATTTTG GATCTTCTGG AGCAATGTGA AATTGATGAT GAAAAGTTGA
1621TGGGAAAAAC TACCAAGACT CGAGGACCAA AGGGTCGAAT AACTCATTAT GTAGTCAAGC
1681TCTTTAAGAA CACTTACCCA ACTTTCTTGT ACAAAGTGGT TGATATCGGT AAGCCTATCC
1741CTAACCCTCT CCTCGGTCTC GATTCTACGT AGTAATGAAC TAGTCCGTAA CTTGAAAGTA
1801TTTCGATTTC TTGGCTTTAT ATATCTTGTG GAAAGGACGA ATACGCACAA GGAAGCCATG
1861CTGTACGCGT TAAGTCgaca atcaacctct ggattacaaa atttgtgaaa gatt

Download FASTA (ORF) (Full)

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