Construct: ORF TRCN0000466732

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF008076.3_s317c1
Derived from:
ccsbBroadEn_06728
DNA Barcode:
GGCTCTGGTGCGGACAGCAGAAGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PIK3R1 (5295)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000466732
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 5295 PIK3R1 phosphoinositide-3-kinase r... NM_181504.4 99.9% 99.7% 541G>A
2 human 5295 PIK3R1 phosphoinositide-3-kinase r... NM_181524.2 92.7% 92% (many diffs)
3 human 5295 PIK3R1 phosphoinositide-3-kinase r... NM_001242466.2 79.4% 79.2% 0_1ins279;262G>A
4 human 5295 PIK3R1 phosphoinositide-3-kinase r... XM_011543493.3 71.4% 66.4% (many diffs)
5 human 5295 PIK3R1 phosphoinositide-3-kinase r... XM_017009586.1 69.4% 64.6% (many diffs)
6 human 5295 PIK3R1 phosphoinositide-3-kinase r... NM_181523.3 60.7% 56.7% (many diffs)
7 human 5295 PIK3R1 phosphoinositide-3-kinase r... XM_005248542.3 60.7% 56.7% (many diffs)
8 human 5295 PIK3R1 phosphoinositide-3-kinase r... XM_017009585.2 60.7% 56.7% (many diffs)
9 mouse 18708 Pik3r1 phosphoinositide-3-kinase r... NM_001024955.2 89.9% 98.2% (many diffs)
10 mouse 18708 Pik3r1 phosphoinositide-3-kinase r... XM_006517569.3 83.5% 91.4% (many diffs)
11 mouse 18708 Pik3r1 phosphoinositide-3-kinase r... XM_006517570.3 79.9% 88.1% (many diffs)
12 mouse 18708 Pik3r1 phosphoinositide-3-kinase r... NM_001077495.2 54.8% 56.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1428
ORF length:
1362
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgta caatactgtt tggaatatgg aagacctgga tttagaatat gccaagacag
121atataaattg tggcacagac ttgatgtttt atatagaaat ggacccacca gcactgcctc
181ctaaaccacc aaaacctact actgtagcca acaacggtat gaataacaat atgtccttac
241aagatgctga atggtactgg ggagatatct cgagggaaga agtgaatgaa aaacttcgag
301atacagcaga cgggaccttt ttggtacgag atgcgtctac taaaatgcat ggtgattata
361ctcttacact aaggaaaggg ggaaataaca aattaatcaa aatatttcat cgagatggga
421aatatggctt ctctgaccca ttaaccttca gttctgtggt tgaattaata aaccactacc
481ggaatgaatc tctagctcag tataatccca aattggatgt gaaattactt tatccagtat
541ccaaatacca acaggatcaa gttgtcaaag aagataatat tgaagctgta gggaaaaaat
601tacataaata taacactcag tttcaagaaa aaagtcgaga atatgataga ttatatgaag
661aatatacccg cacatcccag gaaatccaaa tgaaaaggac agctattgaa gcatttaatg
721aaaccataaa aatatttgaa gaacagtgcc agacccaaga gcggtacagc aaagaataca
781tagaaaagtt taaacgtgaa ggcaatgaga aagaaataca aaggattatg cataattatg
841ataagttgaa gtctcgaatc agtgaaatta ttgacagtag aagaagattg gaagaagact
901tgaagaagca ggcagctgag tatcgagaaa ttgacaaacg tatgaacagc attaaaccag
961accTTATCCA GCTGAGAAAG ACGAGAGACC AATACTTGAT GTGGTTGACT CAAAAAGGTG
1021TTCGGCAAAA GAAGTTGAAC GAGTGGTTGG GCAATGAAAA CACTGAAGAC CAATATTCAC
1081TGGTGGAAGA TGATGAAGAT TTGCCCCATC ATGATGAGAA GACATGGAAT GTTGGAAGCA
1141GCAACCGAAA CAAAGCTGAA AACCTGTTGC GAGGGAAGCG AGATGGCACT TTTCTTGTCC
1201GGGAGAGCAG TAAACAGGGC TGCTATGCCT GCTCTGTAGT GGTGGACGGC GAAGTAAAGC
1261ATTGTGTCAT AAACAAAACA GCAACTGGCT ATGGCTTTGC CGAGCCCTAT AACTTGTACA
1321GCTCTCTGAA AGAACTGGTG CTACATTACC AACACACCTC CCTTGTGCAG CACAACGACT
1381CCCTCAATGT CACACTAGCC TACCCAGTAT ATGCACAGCA GAGGCGATGC CCAACTTTCT
1441TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
1501CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
1561GTGGAAAGGA CGAGGCTCTG GTGCGGACAG CAGAAGCACG CGTTAAGTCg acaatcaacc
1621tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)

GPP Web Portal Terms of Service

Effective Date: December 8, 2025
By using this site, you agree to our terms and conditions below.

Overview of Terms

The data made available on this website were generated for research purposes and are not intended for clinical or commercial uses. Commercial use (or other use for profit-making purposes) of the GPP Web Portal and its tools, is not permitted under these terms and may require a separate license agreement from Broad or its contributors. For more information, please contact partnering@broadinstitute.org.

The original data may be subject to rights claimed by third parties, including but not limited to, patent, copyright, other intellectual property rights, biodiversity-related access and benefit-sharing rights. It is the responsibility of users of Broad Institute services to ensure that their use of the data does not infringe any of the rights of such third parties.

Any questions or comments concerning these Terms of Use can be addressed to: legal@broadinstitute.org.

By accessing and viewing this GPP Web Portal, you agree to the following terms and conditions:

Attribution

You agree to acknowledge the Broad Institute (e.g., in publications, services or products) for any of your use of its online services, databases or software in accordance with good scientific practice. You agree to use the acknowledgment wording provided for the relevant tools as indicated on the FAQ for each tool.

Updating the Terms of Use

We reserve the right to update these Terms of Use at any time. When alterations are inevitable, we will attempt to give reasonable notice of any changes by placing a notice on our website, but you may wish to check each time you use the website. The date of the most recent revision will appear on this, the "GPP Web Portal Terms of Use" page. If you do not agree to these changes, please do not continue to use our online services. We will also make available an archived copy of the previous Terms of Use for comparison.

Indemnification and Disclaimer of Warranties

You are using this GPP Web Portal at your own risk, and you hereby agree to hold Broad and its contributors and their trustees, directors, officers, employees, and affiliated investigators harmless for any third party claims which may arise from your use of the GPP Web Portal, the tools available therein, or any portion thereof. Further, you agree to indemnify Broad, its contributors, and its and their trustees, directors, officers, employees, affiliated investigators, students, and affiliates for any loss, costs, claims, damages, or other liabilities arising from any unpermitted commercial or profit-making use you make of the GPP Web Portal. The GPP Web Portal is a research tool and is provided "as is". Broad does not represent that the GPP Web Portal is free of errors or bugs or suitable for any particular tasks.

ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, NONINFRINGEMENT, OR THE ABSENCE OF LATENT OR OTHER DEFECTS ARE DISCLAIMED. IN NO EVENT SHALL BROAD OR ITS CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THE GPP WEB PORTAL, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.

Governing Law

The terms and conditions herein shall be construed, governed, interpreted, and applied in accordance with the internal laws of the Commonwealth of Massachusetts, U.S.A. Furthermore, by accessing, downloading, or using the Database, You consent to the personal jurisdiction of, and venue in, the state and federal courts within Massachusetts with respect to Your download or use of the Database.