Construct: ORF TRCN0000467876

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003582.1_s317c1
Derived from:
ccsbBroadEn_07045
DNA Barcode:
AGTCAGAACTTTTGAAATTTTATT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TEAD4 (7004)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000467876
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7004 TEAD4 TEA domain transcription fa... NM_201443.3 84.4% 84.4% 0_1ins168
2 human 7004 TEAD4 TEA domain transcription fa... NM_003213.4 83.1% 83.1% 1_219del
3 human 7004 TEAD4 TEA domain transcription fa... NM_201441.3 73.2% 73.2% 1_219del;353_354ins129
4 mouse 21679 Tead4 TEA domain family member 4 NM_011567.2 75.2% 80% (many diffs)
5 mouse 21679 Tead4 TEA domain family member 4 NM_001080979.1 66.1% 71.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1149
ORF length:
1083
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgta tggtcggaac gagctgattg cccgctacat caagctccgg acagggaaga
121cccgcaccag gaagcaggtc tccagccaca tccaggtgct ggctcgtcgc aaagctcgcg
181agatccaggc caagctaaag gaccaggcag ctaaggacaa ggccctgcag agcatggctg
241ccatgtcgtc tgcacagatc atctccgcca cggccttcca cagtagcatg gccctcgccc
301ggggccccgg ccgcccagca gtctcagggt tttggcaagg agctttgcca ggccaagccg
361gaacgtccca tgatgtgaag cctttctctc agcaaaccta tgctgtccag cctccgctgc
421ctctgccagg gtttgagtct cctgcagggc ccgccccatc gccctctgcg cccccggcac
481ccccatggca gggccgcagc gtggccagct ccaagctctg gatgttggag ttctctgcct
541tcctggagca gcagcaggac ccggacacgt acaacaagca cctgttcgtg cacattggcc
601agtccagccc aagctacagc gacccctacc tcgaagccgt ggacatccgc caaatctatg
661acaaattccc ggagaaaaag ggtggactca aggatctctt cgaacgggga ccctccaatg
721ccttttttct tgtgaagttc tgggcagacc tcaacaccaa catcgaggat gaaggcagct
781ccttctatgg ggtctccagc cagtatgaga gccccgagaa catgatcatc acctgcTCCA
841CGAAGGTCTG CTCTTTCGGC AAGCAGGTGG TGGAGAAAGT TGAGACAGAG TATGCTCGCT
901ATGAGAATGG ACACTACTCT TACCGCATCC ACCGGTCCCC GCTCTGTGAG TACATGATCA
961ACTTCATCCA CAAGCTCAAG CACCTCCCTG AGAAGTACAT GATGAACAGC GTGCTGGAGA
1021ACTTCACCAT CCTGCAGGTG GTCACCAACA GAGACACACA GGAGACCTTG CTGTGCATTG
1081CCTATGTCTT TGAGGTGTCA GCCAGTGAGC ACGGGGCTCA GCACCACATC TACAGGCTGG
1141TGAAAGAATG CCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
1201CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1261TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGAAGTCAG AACTTTTGAA ATTTTATTAC
1321GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)