Construct: ORF TRCN0000468129

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005301.1_s317c1
Derived from:
ccsbBroadEn_15500
DNA Barcode:
CTAAGGAAGTGTCAACTCATCATG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MLLT6 (4302)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468129
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4302 MLLT6 MLLT6, PHD finger containing NM_005937.4 28.4% 25.4% (many diffs)
2 mouse 246198 Mllt6 myeloid/lymphoid or mixed-l... XM_006533335.2 29.5% 26.8% (many diffs)
3 mouse 246198 Mllt6 myeloid/lymphoid or mixed-l... NM_139311.2 26.1% 24.4% (many diffs)
4 mouse 246198 Mllt6 myeloid/lymphoid or mixed-l... XM_006533332.2 26.1% 23.7% (many diffs)
5 mouse 246198 Mllt6 myeloid/lymphoid or mixed-l... XM_006533333.2 26% 23.6% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1041
ORF length:
975
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa ggagatggta ggaggctgct gcgtatgttc ggacgagagg ggctgggccg
121agaacccgct ggtctactgc gatgggcacg cgtgcagcgt ggccgtccac caagcttgct
181atggcatcgt tcaggtgcca acgggaccct ggttctgccg gaaatgtgaa tctcaggagc
241gagcagccag ggtgaggtgt gagctgtgcc cacacaaaga cggggcattg aagaggactg
301ataatggagg ctgggcacac gtggtgtgtg ccctctacat ccccgaggtg caatttgcca
361acgtgctcac catggagccc atcgtgctgc agtacgtgcc tcatgatcgc ttcaacaaga
421cctgttacat ctgcgaggag cagggccggg agagcaaggc ggcctcggga gcctgcatga
481cctgtaaccg ccatggatgt cgacaagcct tccacgtcac ctgtgcccaa atggcaggct
541tgctgtgtga ggaagaagtg ctggaggtgg acaacgtcaa gtactgcggc TACTGCAAAT
601ACCACTTCAG CAAGATGAAG ACATCCCGGC ACAGCAGCGG GGGAGGCGGA GGAGGCGCTG
661GAGGAGGAGG TGGCAGCATG GGGGGAGGTG GCAGTGGTTT CATCTCTGGG AGGAGAAGCC
721GGTCAGCCTC ACCATCCACG CAGCAGGAGA AGCACCCCAC CCACCACGAG AGGGGCCAGA
781AGAAGAGTCG AAAGGACAAA GAACGCCTTA AGCAGAAGCA CAAGAAGCGG CCTGAGTCGC
841CCCCCAGCAT CCTCACCCCG CCCGTGGTCC CCACTGCTGA CAAGCCTAGA AGGGGCCACC
901AATCACCGAC CAACCATGGG ATTGGGAGTT TGGGGTGCTG TCTGCCAGAT ACTCCCATCT
961GCCTCTGTCC AGAGGGCCTC AGCCCTGGGC TCTTGTCTGC AGAGAGTGGG GGACGGCACT
1021CAGGCCTGCT CTCCAAGTTC TACCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
1081CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
1141AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGACTAA GGAAGTGTCA
1201ACTCATCATG ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)