Construct: ORF TRCN0000468177

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003844.1_s317c1
Derived from:
ccsbBroadEn_04500
DNA Barcode:
GCCAGAGGAGTAGCTTTAGACTGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
GLB1L2 (89944)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000468177
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 89944 GLB1L2 galactosidase beta 1 like 2 NM_001370461.1 100% 100%
2 human 89944 GLB1L2 galactosidase beta 1 like 2 NM_138342.3 100% 100%
3 human 89944 GLB1L2 galactosidase beta 1 like 2 NM_001370460.1 92.1% 92.1% 732_893del
4 human 89944 GLB1L2 galactosidase beta 1 like 2 NM_001370462.1 40.8% 39.3% (many diffs)
5 human 89944 GLB1L2 galactosidase beta 1 like 2 NM_001370463.1 24.5% 23.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1974
ORF length:
1908
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgac cacgtggagc ctccggcgga ggccggcccg cacgctggga ctcctgctgc
121tggtcgtctt gggcttcctg gtgctccgca ggctggactg gagcaccctg gtccctctgc
181ggctccgcca tcgacagctg gggctgcagg ccaagggctg gaacttcatg ctggaggatt
241ccaccttctg gatcttcggg ggctccatcc actatttccg tgtgcccagg gagtactgga
301gggaccgcct gctgaagatg aaggcctgtg gcttgaacac cctcaccacc tatgttccgt
361ggaacctgca tgagccagaa agaggcaaat ttgacttctc tgggaacctg gacctggagg
421ccttcgtcct gatggccgca gagatcgggc tgtgggtgat tctgcgtcca ggcccctaca
481tctgcagtga gatggacctc gggggcttgc ccagctggct actccaagac cctggcatga
541ggctgaggac aacttacaag ggcttcaccg aagcagtgga cctttatttt gaccacctga
601tgtccagggt ggtgccactc cagtacaagc gtgggggacc tatcattgcc gtgcaggtgg
661agaatgaata tggttcctat aataaagacc ccgcatacat gccctacgtc aagaaggcac
721tggaggaccg tggcattgtg gaactgctcc tgacttcaga caacaaggat gggctgagca
781aggggattgt ccagggagtc ttggccacca tcaacttgca gtcaacacac gagctgcagc
841tactgaccac ctttctcttc aacgtccagg ggactcagcc caagatggtg atggagtact
901ggacggggtg gtttgactcg tggggaggcc ctcacaatat cttggattct tctgaggttt
961tgaaaaccgt gtctgccatt gtggacgccg gctcctccat caacctctac atgttccacg
1021gaggcaccaa ctttggcttc atgaatggag ccatgcactt ccatgactac aagtcagatg
1081tcaccagcta tgactatgat gctgtgctga cagaagccgg cgattacacg gccaagtaca
1141tgaagcttcg agacttcttc ggctccatct caggcatccc tctccctccc ccacctgacc
1201ttcttcccaa gatgccgtat gagcccttaa cgccagtctt gtacctgtct ctgtgggacg
1261ccctcaagta cctgggggag ccaatcaagt ctgaaaagcc catcaacatg gagaacctgc
1321cagtcaatgg gggaaatgga cagtccttcg ggtacattct ctatgagacc agcatcacct
1381cgtctggcat cctcagtggc cacgtgcatg atcgggggca ggtgtttgtg aacacagtat
1441ccataggatt cttggactac aagacaacga agattgctgt ccccctgatc cagggttaca
1501ccgtgctgag gatcttggtg gagaatcgtg ggcgagtcaa ctatggggaG AATATTGATG
1561ACCAGCGCAA AGGCTTAATT GGAAATCTCT ATCTGAATGA TTCACCCCTG AAAAACTTCA
1621GAATCTATAG CCTGGATATG AAGAAGAGCT TCTTTCAGAG GTTCGGCCTG GACAAATGGA
1681GTTCCCTCCC AGAAACACCC ACATTACCTG CTTTCTTCTT GGGTAGCTTG TCCATCAGCT
1741CCACCCCTTG TGACACCTTT CTGAAGCTGG AGGGCTGGGA GAAGGGGGTT GTATTCATCA
1801ATGGCCAGAA CCTTGGACGT TACTGGAACA TTGGACCCCA GAAGACGCTT TACCTCCCAG
1861GTCCCTGGTT GAGCAGCGGA ATCAACCAGG TCATCGTTTT TGAGGAGACG ATGGCGGGCC
1921CTGCATTACA GTTCACGGAA ACCCCCCACC TGGGCAGGAA CCAGTACATT AAGTGCCCAA
1981CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
2041ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
2101TATCTTGTGG AAAGGACGAG CCAGAGGAGT AGCTTTAGAC TGAACGCGTT AAGTCgacaa
2161tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)