Construct: ORF TRCN0000469273

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF015415.1_s317c1
Derived from:
ccsbBroadEn_12662
DNA Barcode:
ATCGAAAAACCCCCCCGTTCATTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TMEM62 (80021)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469273
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 80021 TMEM62 transmembrane protein 62 XM_011522073.1 100% 100%
2 human 80021 TMEM62 transmembrane protein 62 NM_001347019.1 99.3% 99.3% 1_9delATGAAAAAG
3 human 80021 TMEM62 transmembrane protein 62 NM_001347020.1 99.3% 99.3% 1_9delATGAAAAAG
4 human 80021 TMEM62 transmembrane protein 62 NM_001347021.1 99.3% 99.3% 1_9delATGAAAAAG
5 human 80021 TMEM62 transmembrane protein 62 NM_001347023.1 99.3% 99.3% 1_9delATGAAAAAG
6 human 80021 TMEM62 transmembrane protein 62 NM_001347034.1 91.9% 91.9% 756_757ins105
7 human 80021 TMEM62 transmembrane protein 62 NM_001347024.1 91.3% 91.3% 1_9delATGAAAAAG;765_766ins105
8 human 80021 TMEM62 transmembrane protein 62 NM_001347025.1 91.3% 91.3% 1_9delATGAAAAAG;765_766ins105
9 human 80021 TMEM62 transmembrane protein 62 NM_001347026.1 91.3% 91.3% 1_9delATGAAAAAG;765_766ins105
10 human 80021 TMEM62 transmembrane protein 62 NM_001347027.1 91.3% 91.3% 1_9delATGAAAAAG;765_766ins105
11 human 80021 TMEM62 transmembrane protein 62 NM_001347028.1 91.3% 91.3% 1_9delATGAAAAAG;765_766ins105
12 human 80021 TMEM62 transmembrane protein 62 NM_001347029.1 91.3% 91.3% 1_9delATGAAAAAG;765_766ins105
13 human 80021 TMEM62 transmembrane protein 62 XM_024450071.1 90.7% 85.7% 1_46del;163_164ins79
14 human 80021 TMEM62 transmembrane protein 62 XM_011522074.2 90.1% 84.3% 1_55del;172_173ins79
15 human 80021 TMEM62 transmembrane protein 62 NM_001347008.1 85.1% 85.1% 1_228del
16 human 80021 TMEM62 transmembrane protein 62 NM_001347009.1 85.1% 85.1% 1_228del
17 human 80021 TMEM62 transmembrane protein 62 NM_001347010.1 85.1% 85.1% 1_228del
18 human 80021 TMEM62 transmembrane protein 62 NM_001347011.1 85.1% 85.1% 1_228del
19 human 80021 TMEM62 transmembrane protein 62 NM_001347012.1 85.1% 85.1% 1_228del
20 human 80021 TMEM62 transmembrane protein 62 NM_001347013.1 85.1% 85.1% 1_228del
21 human 80021 TMEM62 transmembrane protein 62 NM_001347004.1 84.7% 84.7% 1_234del
22 human 80021 TMEM62 transmembrane protein 62 NM_001347005.1 84.7% 84.7% 1_234del
23 human 80021 TMEM62 transmembrane protein 62 NM_001347006.1 84.7% 84.7% 1_234del
24 human 80021 TMEM62 transmembrane protein 62 NM_001347007.1 84.7% 84.7% 1_234del
25 human 80021 TMEM62 transmembrane protein 62 XM_011522071.1 84.7% 84.7% 1_234del
26 human 80021 TMEM62 transmembrane protein 62 NM_001347030.1 82.9% 77.7% 1_46del;163_164ins79;723_724ins105
27 human 80021 TMEM62 transmembrane protein 62 NM_001347017.1 78.2% 78.2% 1_228del;984_985ins105
28 human 80021 TMEM62 transmembrane protein 62 NM_001347018.1 78.2% 78.2% 1_228del;984_985ins105
29 human 80021 TMEM62 transmembrane protein 62 NM_001347014.1 77.9% 77.9% 1_234del;990_991ins105
30 human 80021 TMEM62 transmembrane protein 62 NM_001347015.1 77.9% 77.9% 1_234del;990_991ins105
31 human 80021 TMEM62 transmembrane protein 62 NM_001347016.1 77.9% 77.9% 1_234del;990_991ins105
32 human 80021 TMEM62 transmembrane protein 62 NM_001347033.1 70.4% 69.1% 1_436del;553_554ins79
33 human 80021 TMEM62 transmembrane protein 62 NM_024956.4 67.6% 67.6% 1_624del
34 human 80021 TMEM62 transmembrane protein 62 NM_001347031.1 64.3% 62.8% 1_436del;553_554ins79;1113_1114ins105
35 human 80021 TMEM62 transmembrane protein 62 NM_001347032.1 62.2% 62.2% 1_624del;1380_1381ins105
36 human 80021 TMEM62 transmembrane protein 62 NR_144541.1 43.1% (many diffs)
37 human 80021 TMEM62 transmembrane protein 62 NR_144544.1 41.1% (many diffs)
38 human 80021 TMEM62 transmembrane protein 62 NR_144542.1 40.4% (many diffs)
39 human 80021 TMEM62 transmembrane protein 62 NR_144543.1 40% (many diffs)
40 human 80021 TMEM62 transmembrane protein 62 XM_024450072.1 24.1% 21.5% (many diffs)
41 mouse 96957 Tmem62 transmembrane protein 62 NM_175285.3 58.1% 56.2% (many diffs)
42 mouse 96957 Tmem62 transmembrane protein 62 XR_374546.3 28.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1371
ORF length:
1305
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga ggagctctta ttactggcca aggaaagcag tcggagcaac catacaattt
121ggtttggaca ctttacaaca tccactattc tttctccatc accaggaatc cggtcaataa
181tgagttcggc tatagcttat ttgtgtggac atctccatac acttggtgga ctgatgcctg
241ttttgcacac tcgtcacttc cagggcactt tggaacttga ggtgggagac tggaaggata
301ataggaggta ccggattttt gcttttgatc acgacctctt tagctttgca gatttgatct
361ttgggaagtg gcctgtggtt cttatcacca atcctaaatc actcctttat agttgtggtg
421aacatgaacc actagaaaga cttcttcact caacacacat cagagtcttg gccttttcct
481tatcctccat tacttctgtc acagttaaga ttgatggagt tcatttaggc caggctgttc
541atgtgtctgg tcccattttc gtactgaagt ggaatcctag aaactacagt agtgggacac
601ataacataga agtaatcgtc caggattctg ctggaagaag taagagtgtt caccacatat
661tttctgttca agagaataat catctcagtt ttgatcccct ggcatcattt attctccgta
721ctgatcacta catcatggcc cgggtccttt ttgtgctgat tgtgctgagc cagctcacca
781ttctcattat ttttagatat cgaggatacc cagagcttaa agaaccttca gggtttataa
841atctgacctc attttctctt catgtcttga gcaaaataaa catcttctac tattctgtgt
901tgttgttgac cctgtataca gtgctgggtc catggttttt tggtgaaatc attgatggca
961aatttggttg ctgcttttcc tttgggatat ttgttaatgg aCATTTCCTA CAAGGCAGCA
1021TAACATTTAT AATTGGAATT CTCCAGCTGG CGTTTTTTAA CATCCCCTTG ATGGCTTACA
1081TGTGTTGGAG CTTGCTGCAG CGGTGCTTTG GTCACAACTT CAGGTCTCAT CTCCATCAAA
1141GAAAATACTT GAAAATTATG CCTGTTCACC TACTTATGCT ACTGCTGTAC ATCTGGCAGG
1201TTTATTCCTG CTACTTTCTT TATGCAACAT ACGGCACCCT AGCTTTTTTA TTCTCCCCTT
1261TGCGGACCTG GTTGACACTG CTGACACCTG TTCTCATTCG TTATGTGTGG ACACTGAACT
1321CCACCAAGTT TGGAATCTTC ATGGTGCAGT TAAAAAGCCA CCTGAGCTCC TGCCCAACTT
1381TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1441CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1501CTTGTGGAAA GGACGAATCG AAAAACCCCC CCGTTCATTC ACGCGTTAAG TCgacaatca
1561acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)