Construct: ORF TRCN0000469314

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002236.1_s317c1
Derived from:
ccsbBroadEn_09363
DNA Barcode:
TGTTTTCCGGTAATCCACTCCGCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
CPA5 (93979)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469314
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 93979 CPA5 carboxypeptidase A5 NM_001127441.2 99.6% 99.7% (many diffs)
2 human 93979 CPA5 carboxypeptidase A5 NM_001318223.2 99.6% 99.7% (many diffs)
3 human 93979 CPA5 carboxypeptidase A5 NM_080385.5 99.6% 99.7% (many diffs)
4 human 93979 CPA5 carboxypeptidase A5 XM_005250710.1 99.6% 99.7% (many diffs)
5 human 93979 CPA5 carboxypeptidase A5 XM_005250712.1 99.6% 99.7% (many diffs)
6 human 93979 CPA5 carboxypeptidase A5 XM_011516698.1 99.6% 99.7% (many diffs)
7 human 93979 CPA5 carboxypeptidase A5 XM_011516701.1 99.6% 99.7% (many diffs)
8 human 93979 CPA5 carboxypeptidase A5 XM_011516702.1 99.6% 99.7% (many diffs)
9 human 93979 CPA5 carboxypeptidase A5 XM_011516703.1 99.6% 99.7% (many diffs)
10 human 93979 CPA5 carboxypeptidase A5 XM_024446999.1 99.6% 99.7% (many diffs)
11 human 93979 CPA5 carboxypeptidase A5 XM_024447000.1 99.6% 99.7% (many diffs)
12 human 93979 CPA5 carboxypeptidase A5 XM_024447001.1 99.6% 99.7% (many diffs)
13 human 93979 CPA5 carboxypeptidase A5 NM_001127442.2 92.1% 80.4% (many diffs)
14 human 93979 CPA5 carboxypeptidase A5 XM_011516704.1 92.1% 80.4% (many diffs)
15 human 93979 CPA5 carboxypeptidase A5 XM_011516705.1 66.9% 64.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1374
ORF length:
1308
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgca gggcactcct ggaggcggga cgcgccctgg gccatccccc gtggacaggc
121ggacactcct ggtcttcagc tttatcctgg cagcagcttt gggccaaatg aatttcacag
181gggaccaggt tcttcgagtc ctggccaaag atgagaagca gctttcactt ctcggggatc
241tggagggcct gaaaccccag aaggtggact tctggcgtgg cccagccagg cccagcctcc
301ctgtggatat gagagttcct ttctccgaac tgaaagacat caaagcttat ctggagtctc
361atggacttgc ttacagcatc atgataaagg acatccaggt gctgctggat gagggaagac
421aggccatggc gaaatcccgc cggctggagc gcagcaccaa cagcttcagt tactcatcat
481accacaccct ggaggagata tatagctgga ttgacaactt tgtaatggag cattccgata
541ttgtctcaaa aattcagatt ggcaacagct ttgaaaacca gtccattctt gtcctgaagt
601tcagcactgg aggttctcgg cacccagcca tctggatcga cactggaatt cactcccggg
661agtggatcac ccatgccacc ggcatctgga ctgccaataa gattgtcagt gattatggca
721aagaccgtgt cctgacagac atactgaatg ccatggacat cttcatagag ctcgtcacaa
781accctgatgg gtttgctttt acccacagca tgaaccgctt atggcggaag aacaagtcca
841tcagacctgg aatcttctgc atcggcgtgg atctcaacag gaactggaag tcgggttttg
901gaggaaatgg ttctaacagc aacccctgct cagaaactta tcacgggccc tccccTCAGT
961CGGAGCCGGA GGTGGCTGCC ATAGTGAACT TCATCACAGC CCATGGCAAC TTCAAGGCTC
1021TGATCTCCAT CCACAGCTAC TCTCAGATGC TTATGTACCC TTACGGCCGA TTGCTGGAGC
1081CCGTTTCAAA TCAGAGGGAG TTGTACGATC TTGCCAAGGA TGCGGTGGAG GCCTTGTATA
1141AGGTCCATGG GATCGAGTAC ATTTTTGGCA GCATCAGCAC CACCCTCTAT GTGGCCAGTG
1201GGATCACCGT CGACTGGGCC TATGACAGTG GCATCAAGTA CGCCTTCAGC TTTGAGCTCC
1261GGGACACTGG GCAGTATGGC TTCCTGCTGC CGGCCACACA GATCATCCCC ACGGCCCAGG
1321AGACGTGGAT GGCGCTTCGG ACCATCATGG AGCACACCCT GAATCACCCC TACTACCCAA
1381CTTTCTTGTA CAAAGTGGTT GATATCGGTA AGCCTATCCC TAACCCTCTC CTCGGTCTCG
1441ATTCTACGTA GTAATGAACT AGTCCGTAAC TTGAAAGTAT TTCGATTTCT TGGCTTTATA
1501TATCTTGTGG AAAGGACGAT GTTTTCCGGT AATCCACTCC GCCACGCGTT AAGTCgacaa
1561tcaacctctg gattacaaaa tttgtgaaag att

Download FASTA (ORF) (Full)