Construct: ORF TRCN0000469427

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018286.1_s317c1
Derived from:
ccsbBroadEn_02209
DNA Barcode:
TGAAGGTAACCAAAGAAGTGTCGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
RNF14 (9604)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469427
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9604 RNF14 ring finger protein 14 NM_001201365.1 100% 100%
2 human 9604 RNF14 ring finger protein 14 NM_004290.5 100% 100%
3 human 9604 RNF14 ring finger protein 14 NM_183399.2 100% 100%
4 human 9604 RNF14 ring finger protein 14 NM_183400.2 100% 100%
5 human 9604 RNF14 ring finger protein 14 NM_183401.3 100% 100%
6 human 9604 RNF14 ring finger protein 14 XM_011537714.3 100% 100%
7 human 9604 RNF14 ring finger protein 14 NM_183398.3 73.4% 73.4% 0_1ins378
8 human 9604 RNF14 ring finger protein 14 XM_005268539.3 73.4% 73.4% 0_1ins378
9 human 9604 RNF14 ring finger protein 14 XM_005268540.4 73.4% 73.4% 0_1ins378
10 human 9604 RNF14 ring finger protein 14 XM_005268541.4 73.4% 73.4% 0_1ins378
11 human 9604 RNF14 ring finger protein 14 XM_017010071.2 73.4% 73.4% 0_1ins378
12 human 9604 RNF14 ring finger protein 14 XM_017010072.2 73.4% 73.4% 0_1ins378
13 human 9604 RNF14 ring finger protein 14 XM_005268542.3 62.8% 62.8% 302_303ins528
14 human 9604 RNF14 ring finger protein 14 XM_005268543.5 62.8% 62.8% 302_303ins528
15 human 9604 RNF14 ring finger protein 14 XM_017010073.2 62.8% 62.8% 302_303ins528
16 human 9604 RNF14 ring finger protein 14 XM_017010074.2 62.8% 62.8% 302_303ins528
17 human 9604 RNF14 ring finger protein 14 XM_017010075.2 62.8% 62.8% 302_303ins528
18 human 9604 RNF14 ring finger protein 14 XM_024446265.1 62.8% 62.8% 302_303ins528
19 mouse 56736 Rnf14 ring finger protein 14 NM_001164621.1 86.1% 88.4% (many diffs)
20 mouse 56736 Rnf14 ring finger protein 14 NM_020012.2 86.1% 88.4% (many diffs)
21 mouse 56736 Rnf14 ring finger protein 14 XM_006526121.2 86.1% 88.4% (many diffs)
22 mouse 56736 Rnf14 ring finger protein 14 XM_006526122.2 86.1% 88.4% (many diffs)
23 mouse 56736 Rnf14 ring finger protein 14 XM_006526123.2 86.1% 88.4% (many diffs)
24 mouse 56736 Rnf14 ring finger protein 14 XM_006526124.2 86.1% 88.4% (many diffs)
25 mouse 56736 Rnf14 ring finger protein 14 XM_006526125.2 86.1% 88.4% (many diffs)
26 mouse 56736 Rnf14 ring finger protein 14 XM_006526126.1 86.1% 88.4% (many diffs)
27 mouse 56736 Rnf14 ring finger protein 14 XM_006526127.2 86.1% 88.4% (many diffs)
28 mouse 56736 Rnf14 ring finger protein 14 XM_017317955.1 86.1% 88.4% (many diffs)
29 mouse 56736 Rnf14 ring finger protein 14 XM_017317956.1 86.1% 88.4% (many diffs)
30 mouse 56736 Rnf14 ring finger protein 14 XM_017317957.1 86.1% 88.4% (many diffs)
31 mouse 56736 Rnf14 ring finger protein 14 NM_001164622.1 61.9% 63.5% (many diffs)
32 mouse 56736 Rnf14 ring finger protein 14 XM_006526128.1 61.9% 63.5% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1491
ORF length:
1422
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gtcgtcagaa gatcgagaag ctcaggagga tgaattgctg gccctggcaa
121gtatttacga tggagatgaa tttagaaaag cagagtctgt ccaaggtgga gaaaccagga
181tctatttgga tttgccacag aatttcaaga tatttgtgag cggcaattca aatgagtgtc
241tccagaatag tggctttgaa tacaccattt gctttctgcc tccacttgtg ctgaactttg
301aactgccacc agattatcca tcctcttccc caccttcatt cacacttagt ggcaaatggc
361tgtcaccaac tcagctatct gctctatgca agcacttaga caacctatgg gaagaacacc
421gtggcagcgt ggtcctgttt gcctggatgc aatttcttaa ggaagagacc ctagcatact
481tgaatattgt ctctcctttt gagctcaaga ttggttctca gaaaaaagtg cagagaagga
541cagctcaagc ttctcccaac acagagctag attttggagg agctgctgga tctgatgtag
601accaagagga aattgtggat gagagagcag tgcaggatgt ggaatcactg tcaaatctga
661tccaggaaat cttggacttt gatcaagctc agcagataaa atgctttaat agtaaattgt
721tcctgtgcag tatctgtttc tgtgagaagc tgggtagtga atgcatgtac ttcttggagt
781gcaggcatgt gtactgcaaa gcctgtctga aggactactt tgaaatccag atcagagatg
841gccaggttca atgcctcaac tgcccagaac caaagtgccc ttcggtggcc actcctggtc
901aggtcaaaga gttagtggaa gcagagttat ttgcccgtta tgaccgcctt ctcctccagt
961cctccttgga cctgatggca gatgtggtgt actgcccccg gccgtgctgc cagctgcctg
1021tgatgcagga acctggctgc accatgggta tctgctccag ctgcaatttt gccttctgta
1081ctttgtgcag gttgacctac catggGGTCT CCCCATGTAA GGTGACTGCA GAGAAATTAA
1141TGGACTTACG AAATGAATAC CTGCAAGCGG ATGAGGCTAA TAAAAGACTT TTGGATCAAA
1201GGTATGGTAA GAGAGTGATT CAGAAGGCAC TGGAAGAGAT GGAAAGTAAG GAGTGGCTAG
1261AGAAGAACTC AAAGAGCTGC CCATGTTGTG GAACTCCCAT AGAGAAATTA GACGGATGTA
1321ACAAGATGAC ATGTACTGGC TGTATGCAAT ATTTCTGTTG GATTTGCATG GGTTCTCTCT
1381CTAGAGCAAA CCCTTACAAA CATTTCAATG ACCCTGGTTC ACCATGTTTT AACCGGCTGT
1441TTTATGCTGT GGATGTTGAC GACGATATTT GGGAAGATGA GGTAGAAGAC TTGCCAACTT
1501TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
1561CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
1621CTTGTGGAAA GGACGATGAA GGTAACCAAA GAAGTGTCGC ACGCGTTAAG TCgacaatca
1681acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)

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