Construct: ORF TRCN0000469626

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF017886.1_s317c1
Derived from:
ccsbBroadEn_03923
DNA Barcode:
ACAGCAATTCGCGGCATTTTCGAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LRRC4 (64101)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000469626
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64101 LRRC4 leucine rich repeat contain... NM_022143.5 100% 100%
2 human 64101 LRRC4 leucine rich repeat contain... XM_011516461.3 100% 100%
3 mouse 192198 Lrrc4 leucine rich repeat contain... NM_138682.2 92.8% 97.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2028
ORF length:
1959
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaagctcttg tggcaggtaa ctgtgcacca ccacacctgg aatgccatcc
121tgctcccgtt cgtctacctc acggcgcaag tgtggattct gtgtgcagcc atcgctgctg
181ccgcctcagc cgggccccag aactgcccct ccgtctgctc gtgcagtaac cagttcagca
241aggtggtgtg cacgcgccgg ggcctctccg aggtcccgca gggtattccc tcgaacaccc
301ggtacctcaa cctcatggag aacaacatcc agatgatcca ggccgacacc ttccgccacc
361tccaccacct ggaggtcctg cagttgggca ggaactccat ccggcagatt gaggtggggg
421ccttcaacgg cctggccagc ctcaacaccc tggagctgtt cgacaactgg ctgacagtca
481tccctagcgg ggcctttgaa tacctgtcca agctgcggga gctctggctt cgcaacaacc
541ccatcgaaag catcccctct tacgccttca accgggtgcc ctccctcatg cgcctggact
601tgggggagct caagaagctg gagtatatct ctgagggagc ttttgagggg ctgttcaacc
661tcaagtatct gaacttgggc atgtgcaaca ttaaagacat gcccaatctc acccccctgg
721tggggctgga ggagctggag atgtcaggga accacttccc tgagatcagg cctggctcct
781tccatggcct gagctccctc aagaagctct gggtcatgaa ctcacaggtc agcctgattg
841agcggaatgc ttttgacggg ctggcttcac ttgtggaact caacttggcc cacaataacc
901tctcttcttt gccccatgac ctctttaccc cgctgaggta cctggtggag ttgcatctac
961accacaaccc ttggaactgt gattgtgaca ttctgtggct agcctggtgg cttcgagagt
1021atatacccac caattccacc tgctgtggcc gctgtcatgc tcccatgcac atgcgaggcc
1081gctacctcgt ggaggtggac caggcctcct tccagtgctc tgcccccttc atcatggacg
1141cacctcgaga cctcaacatt tctgagggtc ggatggcaga acttaagtgt cggactcccc
1201ctatgtcctc cgtgaagtgg ttgctgccca atgggacagt gctcagccac gcctcccgcc
1261acccaaggat ctctgtcctc aacgacggca ccttgaactt ttcccacgtg ctgctttcag
1321acactggggt gtacacatgc atggtgacca atgttgcagg caactccaac gcctcggcct
1381acctcaatgt gagcacggct gagcttaaca cctccaacta cagcttcttc accacagtaa
1441cagtggagac cacggagatc tcgcctgagg acacaacgcg aaagtacaag cctgttccta
1501ccacgtccac tggttaccag ccggcatata ccacctctac cacggtgctc attcagacta
1561cccgtgtgcc caagcaggtg gcagtacccg cgacagacac cactgacaag atgcagacca
1621gccTGGATGA AGTCATGAAG ACCACCAAGA TCATCATTGG CTGCTTTGTG GCAGTGACTC
1681TGCTAGCTGC CGCCATGTTG ATTGTCTTCT ATAAACTTCG TAAGCGGCAC CAGCAGCGGA
1741GTACAGTCAC AGCCGCCCGG ACTGTTGAGA TAATCCAGGT GGACGAAGAC ATCCCAGCAG
1801CAACATCCGC AGCAGCAACA GCAGCTCCGT CCGGTGTATC AGGTGAGGGG GCAGTAGTGC
1861TGCCCACAAT TCATGACCAT ATTAACTACA ACACCTACAA ACCAGCACAT GGGGCCCACT
1921GGACAGAAAA CAGCCTGGGG AACTCTCTGC ACCCCACAGT CACCACTATC TCTGAACCTT
1981ATATAATTCA GACCCATACC AAGGACAAGG TACAGGAAAC TCAAATATTG CCAACTTTCT
2041TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
2101CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
2161GTGGAAAGGA CGAACAGCAA TTCGCGGCAT TTTCGAAACG CGTTAAGTCg acaatcaacc
2221tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)