Construct: ORF TRCN0000471195

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF002951.1_s317c1
Derived from:
ccsbBroadEn_13305
DNA Barcode:
ACTAATGTCAGATACCACCTCCTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF483 (158399)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471195
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 158399 ZNF483 zinc finger protein 483 XM_017014339.1 100% 100%
2 human 158399 ZNF483 zinc finger protein 483 NM_001007169.5 94.7% 94.5% (many diffs)
3 human 158399 ZNF483 zinc finger protein 483 NM_133464.5 32.6% 32.2% (many diffs)
4 human 158399 ZNF483 zinc finger protein 483 XM_011518300.2 32.6% 32.2% (many diffs)
5 human 158399 ZNF483 zinc finger protein 483 XM_017014337.1 32.6% 32.2% (many diffs)
6 human 158399 ZNF483 zinc finger protein 483 XM_017014338.1 32.6% 32.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
798
ORF length:
732
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgca agctgtagtg cccttgaaca agatgacagc catctcacca gaacctcaaa
121ctctggcctc gactgaacaa aatgaggtcc caagagtggt tacttctggg gaacaagaag
181ctattttaag aggaaatgct gctgatgcag agtctttcag acagaggttt aggtggtttt
241gttactcaga agtagctgga cccaggaaag ctctgagtca actctgggag ctctgcaatc
301agtggctgag accagacatt cacacgaaag aacagatttt agagcttctg gtgtttgagc
361agttcctgac cattttgcct ggggagatca ggatttgggt aaagtcacaa catcctgaga
421gtagtgagga agtggtgacc ctaatagaag atttgaccca gatgcttgaa gaaaaagatc
481cagtctctca agattctact gtttcccaag aggagaactc aaaagaggat aaaatggtca
541ctgtttgtcc caatacTGAG TCCTGTGAAT CTATAACATT GAAGGATGTA GCTGTGAACT
601TTTCAAGAGG AGAGTGGAAG AAGCTGGAGC CTTTTCAAAA GGAGCTATAT AAGGAAGTGC
661TACTGGAAAA CCTCAGGAAC CTAGAATTTC TGGACTTTCC AGTTTCAAAA TTAGAGTTGA
721TTTCCCAGCT AAAGTGGGTT GAATTGCCAT GGCTGCTGGA AGAAGTCTCA AAAAGCTCCC
781GACTAGGAAG TGTGATTTGC CCAACTTTCT TGTACAAAGT GGTTGATATC GGTAAGCCTA
841TCCCTAACCC TCTCCTCGGT CTCGATTCTA CGTAGTAATG AACTAGTCCG TAACTTGAAA
901GTATTTCGAT TTCTTGGCTT TATATATCTT GTGGAAAGGA CGAACTAATG TCAGATACCA
961CCTCCTCACG CGTTAAGTCg acaatcaacc tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)