Construct: ORF TRCN0000471681

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF014629.1_s317c1
Derived from:
ccsbBroadEn_06967
DNA Barcode:
AACAGATAGCAAAAAACGACCTCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC15A1 (6564)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000471681
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 6564 SLC15A1 solute carrier family 15 me... NM_005073.4 99.9% 99.8% 952C>G;1347T>C
2 mouse 56643 Slc15a1 solute carrier family 15 (o... NM_053079.2 83.3% 85% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2193
ORF length:
2124
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gggaatgtcc aaatcacaca gtttctttgg ttatcccctg agcatcttct
121tcatcgtggt caatgagttt tgcgaaagat tttcctacta tggaatgcga gcaatcctga
181ttctgtactt cacaaatttc atcagctggg atgataacct gtccaccgcc atctaccata
241cgtttgtggc tctgtgctac ctgacgccaa ttctcggagc tcttatcgcc gactcgtggc
301tgggaaagtt caagaccatt gtgtcgctct ccattgtcta cacaattgga caagcagtca
361cctcagtaag ctccattaat gacctcacag accacaacca tgatggcacc cccgacagcc
421ttcctgtgca cgtggtgctg tccttgatcg gcctggccct gatagctctc gggactggag
481gaatcaaacc ctgtgtgtct gcgtttggtg gagatcagtt tgaagagggc caggagaaac
541aaagaaacag atttttttcc atcttttact tggctattaa tgctggaagt ttgctttcca
601caatcatcac acccatgctc agagttcaac aatgtggaat tcacagtaaa caagcttgtt
661acccactggc ctttggggtt cctgctgctc tcatggctgt agccctgatt gtgtttgtcc
721ttggcagtgg gatgtacaag aagttcaagc cacagggcaa catcatgggt aaagtggcca
781agtgcatcgg ttttgccatc aaaaatagat ttaggcatcg gagtaaggca tttcccaaga
841gggagcactg gctggactgg gctaaagaga aatacgatga gcggctcatc tcccaaatta
901agatggttac gagggtgatg ttcctgtata ttccactccc aatgttctgg gccttgtttg
961accagcaggg ctccaggtgg acactgcagg caacaactat gtccgggaaa atcggagctg
1021ttgaaattca gcccgatcag atgcagaccg tgaacgccat cctgatcgtg atcatggtcc
1081cgatcttcga tgctgtgctg taccctctca ttgcaaaatg tggcttcaat ttcacctcct
1141tgaagaagat ggcagttggc atggtcctgg cctccatggc ctttgtggtg gctgccatcg
1201tgcaggtgga aatcgataaa actcttccag tcttccccaa aggaaacgaa gtccaaatta
1261aagttttgaa tataggaaac aataccatga atatatctct tcctggagag atggtgacac
1321ttggcccaat gtctcaaaca aatgcattta tgacttttga tgtaaacaaa ctgacaagga
1381taaacatttc ttctcctgga tcaccagtca ctgccgtaac tgacgacttc aagcagggcc
1441aacgccacac gcttctagtg tgggccccca atcactacca ggtggtaaag gatggtctta
1501accagaagcc agaaaaaggg gaaaatggaa tcagatttgt aaatactttt aacgagctca
1561tcaccatcac aatgagtggg aaagtttatg caaacatcag cagctacaat gccagcacat
1621accagttttt tccttctggc ataaaaggct tcacaataag ctcaacagag attccgccac
1681aatgtcaacc taatttcaat actttctacc ttgaatttgg tagtgcttat acctatatag
1741tccaaaggaa gaatgacagc tgccctgaag tgaaggtgtt tGAAGATATT TCAGCCAACA
1801CAGTTAACAT GGCTCTGCAA ATCCCGCAGT ATTTTCTTCT CACCTGTGGC GAAGTGGTCT
1861TCTCTGTCAC GGGATTGGAA TTCTCATATT CTCAGGCTCC TTCCAACATG AAGTCGGTGC
1921TTCAGGCAGG ATGGCTGCTG ACCGTGGCTG TTGGCAACAT CATTGTGCTC ATCGTGGCAG
1981GGGCAGGCCA GTTCAGCAAA CAGTGGGCCG AGTACATTCT ATTTGCCGCG TTGCTTCTGG
2041TCGTCTGTGT AATTTTTGCC ATCATGGCTC GGTTCTATAC TTACATCAAC CCAGCGGAGA
2101TCGAAGCTCA ATTTGATGAG GATGAAAAGA AAAACAGACT GGAAAAGAGT AACCCATATT
2161TCATGTCAGG GGCCAATTCA CAGAAACAGA TGTTGCCAAC TTTCTTGTAC AAAGTGGTTG
2221ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
2281GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGAAA
2341CAGATAGCAA AAAACGACCT CTACGCGTTA AGTCgacaat caacctctgg attacaaaat
2401ttgtgaaaga tt

Download FASTA (ORF) (Full)