Construct: ORF TRCN0000472027

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001846.1_s317c1
Derived from:
ccsbBroadEn_08858
DNA Barcode:
GAAAGTGATAGAGCAAGGCCTCGG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TEKT3 (64518)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472027
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 64518 TEKT3 tektin 3 NM_031898.3 99.7% 99.7% 802G>A;1017A>G;1362A>C
2 human 64518 TEKT3 tektin 3 XM_011523988.2 99.7% 99.7% 802G>A;1017A>G;1362A>C
3 human 64518 TEKT3 tektin 3 XM_011523989.1 99.7% 99.7% 802G>A;1017A>G;1362A>C
4 human 64518 TEKT3 tektin 3 XM_017024954.1 99.7% 99.7% 802G>A;1017A>G;1362A>C
5 human 64518 TEKT3 tektin 3 XM_011523990.2 65.9% 65.9% (many diffs)
6 human 64518 TEKT3 tektin 3 XM_017024955.1 65.9% 65.9% (many diffs)
7 human 64518 TEKT3 tektin 3 XM_017024956.1 49.1% 45.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1536
ORF length:
1470
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgga acgtgtaggt tgtactttaa cgacaactta cgcccaccct agaccaacac
121caaccaactt tctaccagcc atcagtacca tggcctcaag ctacagggac cgctttcccc
181actccaattt gacccatagc ctgagccttc cttggagacc cagcacatac tacaaagtcg
241cctccaattc cccaagcgtg gccccgtact gcaccagatc acagagggtg tccgagaata
301ccatgcttcc ctttgtttcc aacagaacca ctttcttcac aagatacaca ccggatgact
361ggtacaggtc caatttaacc aactatcaag agtccaacac ttcccgacat aattcggaga
421aactaagagt ggatacatct cgcctgattc aagacaaata tcaacaaaca agaaaaactc
481aggcagacac aacccaaaat ctgggagaac gtgtcaatga catagggttt tggaaatctg
541aaatcattca tgagttggat gaaatgattg gagagacaaa tgcacttact gatgtgaaga
601aaagactgga gcgggctttg atggagactg aagcccctct tcaggtagcc cgagaatgtc
661tatttcatcg agaaaagaga atgggaatcg acctagttca cgatgaagtt gaagcacaac
721tgctgacgga agttgatact attctgtgtt gtcaagaaag aatgaagcta catttggata
781aggctattgc ccaacttgca gccaacagag cgtcccagca tgagctggaa aaggacctga
841gtgacaaaca gacggcttac cggatcaacg acaaatgcca ccacctgcgc aacacatcag
901acggtgtcgg ctacttccgc ggagtggaga gggtcgatgc aactgtctca gtgcctgagt
961cctgggccaa atttacagat gacaatattc tccgctccca gagtgaacgg gcagcttccg
1021ctaagctaag agacgacatt gaaaacctct tGGTTGTGAC TGCCAATGAG ATGTGGAATC
1081AGTTCAACAA AGTGAACTTG TCTTTCACCA ATCGCATTGC TGAGACTGCA GATGCTAAGA
1141ATAAGATTCA GACGCACTTA GCAAAGACCC TGCAGGAGAT TTTCCAGACT GAAATGACCA
1201TAGAATCCAT CAAGAAGGCC ATCAAGGACA AGACTGCCTT CCTGAAGGTG GCTCAGACCA
1261GACTGGATGA GCGCACAAGA CGGCCGAACA TTGAGTTGTG CCGAGACATG GCTCAGCTAC
1321GCCTTGTTAA CGAGGTACAC GAGGTTGACG ACACCATCCA GACCCTGCAG CAGCGCCTGA
1381GGGATGCAGA GGACACCCTG CAGTCGCTGG TCCACATCAA AGCCACCCTC GAGTATGACC
1441TGGCTGTCAA AGCCAATTCC CTGTACATCG ACCAGGAAAA ATGCATGAGC ATGCGCAAGA
1501GCTACCCCAA CACCCTCCGG CTGGTCGGCT TCTGCTACCC AACTTTCTTG TACAAAGTGG
1561TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
1621CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
1681AGAAAGTGAT AGAGCAAGGC CTCGGACGCG TTAAGTCgac aatcaacctc tggattacaa
1741aatttgtgaa agatt

Download FASTA (ORF) (Full)