Construct: ORF TRCN0000472269

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016816.1_s317c1
Derived from:
ccsbBroadEn_10952
DNA Barcode:
CTTTCGCACCTTGTACGGACCGCT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
LRP1 (4035)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472269
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4035 LRP1 LDL receptor related protein 1 NM_002332.3 6.3% 6.1% (many diffs)
2 human 4035 LRP1 LDL receptor related protein 1 XM_017019303.1 6.3% 6.1% (many diffs)
3 mouse 16971 Lrp1 low density lipoprotein rec... NM_008512.2 5.6% 5.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
942
ORF length:
876
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgct gaccccgccg ttgctcctgc tgctgcccct gctctcagct ctggtcgcgg
121cggctatcga cgcccctaag acttgcagcc ccaagcagtt tgcctgcaga gatcaaataa
181cctgtatctc aaagggctgg cggtgcgacg gtgagaggga ctgcccagac ggatctgacg
241aggcccctga gatttgtcca cagagtaagg cccagcgatg ccagccaaac gagcataact
301gcctgggtac tgagctgtgt gttcccatgt cccgcctctg caatggggtc caggactgca
361tggacggctc agatgagggg ccccactgcc gagagctcca aggcaactgc tctcgcctgg
421gctgccagca ccattgtgtc cccacactcg atgggcccac ctgctactgc aacagcagct
481ttcagcttca ggcagatggc aagacctgca aagattttga tgagtgctca gtgtacggca
541cctgcagcca gctatgcacc aacacagacg gctccttcat atgtggctgt gttgaaggat
601accTCCTGCA GCCGGATAAC CGCTCCTGCA AGGCCAAGAA CGAGCCAGTA GACCGGCCCC
661CTGTGCTGTT GATAGCCAAC TCCCAGAACA TCTTGGCCAC GTACCTGAGT GGGGCCCAGG
721TGTCTACCAT CACACCTACG AGCACGCGGC AGACCACAGC CATGGACTTC AGCTATGCCA
781ACGAGACCGT ATGCTGGGTG CATGTTGGGG ACAGTGCTGC TCAGACGCAG CTCAAGTGTG
841CCCGCATGCC TGGCCTAAAG GGCTTCGTGG ATGAGCACAC CATCAACATC TCCCTCAGTC
901TGCACCTGTG TGTGTTTTCG AAATCACAAC AGGAAATGGG GTACCCAACT TTCTTGTACA
961AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
1021AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
1081AGGACGACTT TCGCACCTTG TACGGACCGC TACGCGTTAA GTCgacaatc aacctctgga
1141ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)