Construct: ORF TRCN0000472383

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009930.1_s317c1
Derived from:
ccsbBroadEn_05292
DNA Barcode:
AGTTTACATGTATCCGCCAGTTAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MSRB3 (253827)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472383
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 253827 MSRB3 methionine sulfoxide reduct... NM_001031679.3 100% 100%
2 human 253827 MSRB3 methionine sulfoxide reduct... NM_001193460.2 100% 100%
3 human 253827 MSRB3 methionine sulfoxide reduct... NM_001193461.1 100% 100%
4 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448918.1 100% 100%
5 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448919.1 100% 100%
6 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448920.1 100% 100%
7 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448921.1 100% 100%
8 human 253827 MSRB3 methionine sulfoxide reduct... NM_198080.4 86.8% 83.4% (many diffs)
9 human 253827 MSRB3 methionine sulfoxide reduct... XM_024448922.1 31.3% 29.2% (many diffs)
10 mouse 320183 Msrb3 methionine sulfoxide reduct... NM_177092.4 85.8% 92% (many diffs)
11 mouse 320183 Msrb3 methionine sulfoxide reduct... XM_006513764.3 63.4% 67.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
621
ORF length:
555
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtc tgcattcaac ctgctgcatt tggtgacaaa gagccagcca gtagcccttc
121gagcctgtgg gcttcccTCA GGGTCGTGTA GGGATAAAAA GAACTGTAAG GTGGTCTTTT
181CCCAGCAGGA ACTGAGGAAG CGGCTAACAC CCCTGCAGTA CCATGTCACT CAGGAGAAAG
241GGACCGAAAG TGCCTTTGAA GGAGAATACA CACATCACAA AGATCCTGGA ATATATAAAT
301GTGTTGTTTG TGGAACTCCA TTGTTTAAGT CAGAAACCAA ATTTGACTCC GGTTCAGGTT
361GGCCTTCATT CCACGATGTG ATCAATTCTG AGGCAATCAC ATTCACAGAT GACTTTTCCT
421ATGGGATGCA CAGGGTGGAA ACAAGCTGCT CTCAGTGTGG TGCTCACCTT GGGCACATTT
481TTGATGATGG GCCTCGTCCA ACTGGGAAAA GATACTGCAT AAATTCGGCT GCCTTGTCTT
541TTACACCTGC GGATAGCAGT GGCACCGCCG AGGGAGGCAG TGGGGTCGCC AGCCCGGCCC
601AGGCAGACAA AGCGGAGCTC TACCCAACTT TCTTGTACAA AGTGGTTGAT ATCGGTAAGC
661CTATCCCTAA CCCTCTCCTC GGTCTCGATT CTACGTAGTA ATGAACTAGT CCGTAACTTG
721AAAGTATTTC GATTTCTTGG CTTTATATAT CTTGTGGAAA GGACGAAGTT TACATGTATC
781CGCCAGTTAC ACGCGTTAAG TCgacaatca acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)