Construct: ORF TRCN0000472691

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005890.1_s317c1
Derived from:
ccsbBroadEn_01877
DNA Barcode:
TCATCGAAGGACGTCAGACTTTAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
NAA10 (8260)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472691
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 8260 NAA10 N(alpha)-acetyltransferase ... NM_003491.4 100% 100%
2 human 8260 NAA10 N(alpha)-acetyltransferase ... NM_001256120.2 97.4% 97.4% 161_162insGTATGTCCTGGCCAAAAT
3 human 8260 NAA10 N(alpha)-acetyltransferase ... NM_001256119.2 93.6% 93.1% 341_342ins45
4 mouse 56292 Naa10 N(alpha)-acetyltransferase ... NM_019870.3 91.9% 96.1% (many diffs)
5 mouse 56292 Naa10 N(alpha)-acetyltransferase ... XM_017318575.1 71% 74.3% (many diffs)
6 mouse 56292 Naa10 N(alpha)-acetyltransferase ... NM_001177965.1 66.9% 66.7% (many diffs)
7 mouse 56292 Naa10 N(alpha)-acetyltransferase ... NM_001310538.1 62.8% 67.6% (many diffs)
8 mouse 56292 Naa10 N(alpha)-acetyltransferase ... XM_011247647.2 62.5% 42.6% (many diffs)
9 mouse 56292 Naa10 N(alpha)-acetyltransferase ... XM_017318574.1 53.1% 52.6% (many diffs)
10 mouse 56292 Naa10 N(alpha)-acetyltransferase ... XM_011247649.1 51.8% 55% (many diffs)
11 mouse 56292 Naa10 N(alpha)-acetyltransferase ... XM_017318576.1 48.8% 52.3% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
771
ORF length:
705
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgaa catccgcaat gcgaggccag aggacctaat gaacatgcag cactgcaacc
121tcctctgcct gcccgagaac taccagatga aatactactt ctaccatggc ctttcctggc
181cccagctctc ttacattgct gaggacgaga atgggaagat tgtggggtat gtcctggcca
241aaatggaaga ggacccagat gatgtgcccc atggacatat cacctcattg gctgtgaagc
301gttcccaccG GCGCCTCGGT CTGGCTCAGA AACTGATGGA CCAGGCCTCT CGAGCCATGA
361TAGAGAACTT CAATGCCAAA TATGTCTCCC TGCATGTCAG GAAGAGTAAC CGGGCCGCCC
421TGCACCTCTA TTCCAACACC CTCAACTTTC AGATCAGTGA AGTGGAGCCC AAATACTATG
481CAGATGGGGA GGACGCCTAT GCCATGAAGC GGGACCTCAC TCAGATGGCC GACGAGCTGA
541GGCGGCACCT GGAGCTGAAA GAGAAGGGCA GGCACGTGGT GCTGGGTGCC ATCGAGAACA
601AGGTGGAGAG CAAAGGCAAT TCACCTCCGA GCTCAGGAGA GGCCTGTCGC GAGGAGAAGG
661GCCTGGCTGC CGAGGATAGT GGTGGGGACA GCAAGGACCT CAGCGAGGTC AGCGAGACCA
721CAGAGAGCAC AGATGTCAAG GACAGCTCAG AGGCCTCCGA CTCAGCCTCC TACCCAACTT
781TCTTGTACAA AGTGGTTGAT ATCGGTAAGC CTATCCCTAA CCCTCTCCTC GGTCTCGATT
841CTACGTAGTA ATGAACTAGT CCGTAACTTG AAAGTATTTC GATTTCTTGG CTTTATATAT
901CTTGTGGAAA GGACGATCAT CGAAGGACGT CAGACTTTAA ACGCGTTAAG TCgacaatca
961acctctggat tacaaaattt gtgaaagatt

Download FASTA (ORF) (Full)