Construct: ORF TRCN0000472902

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF016496.1_s317c1
Derived from:
ccsbBroadEn_00166
DNA Barcode:
ATCCAAGTAAGTCGTATTTTTTTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BMP5 (653)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000472902
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 653 BMP5 bone morphogenetic protein 5 NM_021073.4 100% 100%
2 human 653 BMP5 bone morphogenetic protein 5 NM_001329754.2 91.8% 91.8% 1103_1104ins111
3 human 653 BMP5 bone morphogenetic protein 5 XM_011514817.3 77.9% 74.4% (many diffs)
4 human 653 BMP5 bone morphogenetic protein 5 NM_001329756.2 76.4% 75% (many diffs)
5 human 653 BMP5 bone morphogenetic protein 5 XM_024446524.1 50.4% 50.2% 682_683insG;687_688ins674
6 mouse 12160 Bmp5 bone morphogenetic protein 5 NM_007555.4 89.4% 93.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1428
ORF length:
1362
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgca tctgactgta tttttactta agggtattgt gggtttcctc tggagctgct
121gggttctagt gggttatgca aaaggaggtt tgggagacaa tcatgttcac tccagtttta
181tttatagaag actacggaac cacgaaagac gggaaataca aagggaaatt ctctctatct
241tgggtttgcc tcacagaccc agaccatttt cacctggaaa acaagcgtcc tctgcacctc
301tctttatgct ggatctctac aatgccatga ccaatgaaga aaatcctgaa gagtcggagt
361actcagtaag ggcatccttg gcagaagaga ccagaggggc aagaaaggga tacccagcct
421ctcccaatgg gtatcctcgt cgcatacagt tatctcggac gactcctctg accacccaga
481gtcctcctct agccagcctc catgatacca actttctgaa tgatgctgac atggtcatga
541gctttgtcaa cttagttgaa agagacaagg atttttctca ccagcgaagg cattacaaag
601aatttcgatt tgatcttacc caaattcctc atggagaggc agtgacagca gctgaattcc
661ggatatacaa ggaccggagc aacaaccgat ttgaaaatga aacaattaag attagcatat
721atcaaatcat caaggaatac acaaataggg atgcagatct gttcttgtta gacacaagaa
781aggcccaagc tttagatgtg ggttggcttg tctttgatat cactgtgacc agcaatcatt
841gggtgattaa tccccagaat aatttgggct tacagctctg tgcagaaaca ggggatggac
901gcagtatcaa cgtaaaatct gctggtcttg tgggaagaca gggacctcag tcaaaacaac
961cattcatggt ggccTTCTTC AAGGCGAGTG AGGTACTTCT TCGATCCGTG AGAGCAGCCA
1021ACAAACGAAA AAATCAAAAC CGCAATAAAT CCAGCTCTCA TCAGGACTCC TCCAGAATGT
1081CCAGTGTTGG AGATTATAAC ACAAGTGAGC AAAAACAAGC CTGTAAGAAG CACGAACTCT
1141ATGTGAGCTT CCGGGATCTG GGATGGCAGG ACTGGATTAT AGCACCAGAA GGATACGCTG
1201CATTTTATTG TGATGGAGAA TGTTCTTTTC CACTTAACGC CCATATGAAT GCCACCAACC
1261ACGCTATAGT TCAGACTCTG GTTCATCTGA TGTTTCCTGA CCACGTACCA AAGCCTTGTT
1321GTGCTCCAAC CAAATTAAAT GCCATCTCTG TTCTGTACTT TGATGACAGC TCCAATGTCA
1381TTTTGAAAAA ATATAGAAAT ATGGTAGTAC GCTCATGTGG CTGCCACAAC CCAACTTTCT
1441TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
1501CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
1561GTGGAAAGGA CGAATCCAAG TAAGTCGTAT TTTTTTAACG CGTTAAGTCg acaatcaacc
1621tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)