Construct: ORF TRCN0000474799

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF011290.1_s317c1
Derived from:
ccsbBroadEn_00958
DNA Barcode:
TGCACTATCACAGGATTGACTAAC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
MAB21L1 (4081)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474799
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 4081 MAB21L1 mab-21 like 1 NM_005584.5 100% 100%
2 human 10586 MAB21L2 mab-21 like 2 NM_006439.5 79.6% 94.1% (many diffs)
3 mouse 17116 Mab21l1 mab-21-like 1 (C. elegans) NM_010750.3 90.2% 100% (many diffs)
4 mouse 23937 Mab21l2 mab-21-like 2 NM_011839.4 78.7% 93.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1143
ORF length:
1077
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgat tgcggcccag gccaagctgg tctaccatct gaataaatac tacaacgaaa
121aatgccaagc caggaaagct gccattgcca aaactatccg ggaagtctgc aaagtagttt
181ccgacgtact gaaggaagtg gaagtgcagg agccgcggtt catcagctct ctcaacgaga
241tggacaatcg ctacgagggc ctcgaggtca tctcccccac cgaatttgaa gtggtgcttt
301atctcaacca aatgggggtg ttcaacttcg tggacgatgg ctcactgccc ggctgcgcgg
361tgctgaagtt gagcgacggg cgcaagagga gcatgtccct ctgggtggaa ttcattaccg
421cctccggcta cctctcggcg cgcaaaatcc ggtccaggtt tcagacgctg gtggctcaag
481cggtagacaa atgtagctac cgggatgtgg taaagatggt ggcagacacc agcgaagtga
541aactgagaat ccgagatagg tacgtggtgc agatcacgcc ggcctttaaa tgcaccggga
601tctggccgag gagtgctgcc cactggccac ttccccacat cccctggccg ggacccaacc
661gggtggcgga ggtcaaggcg gaaggtttca atctcttgtc caaggagtgc cactccttgg
721ccggcaagca gagctcggcg gagagcGACG CCTGGGTGCT GCAGTTCGCG GAGGCAGAGA
781ACAGACTGCA GATGGGGGGC TGCAGAAAGA AGTGCCTCTC CATCCTCAAA ACCTTAAGGG
841ATCGTCACCT TGAACTGCCG GGCCAGCCCT TGAACAATTA CCATATGAAG ACTCTGGTTT
901CCTACGAGTG TGAAAAGCAT CCCCGAGAGT CGGACTGGGA CGAGTCTTGC CTGGGTGATC
961GGCTGAACGG GATTTTGCTG CAACTTATCT CCTGCCTGCA GTGCCGGCGG TGTCCCCACT
1021ACTTTCTACC GAACTTAGAT CTGTTTCAAG GCAAACCTCA CTCAGCTCTG GAAAACGCTG
1081CCAAACAAAC GTGGCGACTG GCAAGAGAGA TCCTGACCAA CCCGAAAAGT TTGGAAAAAC
1141TTTACCCAAC TTTCTTGTAC AAAGTGGTTG ATATCGGTAA GCCTATCCCT AACCCTCTCC
1201TCGGTCTCGA TTCTACGTAG TAATGAACTA GTCCGTAACT TGAAAGTATT TCGATTTCTT
1261GGCTTTATAT ATCTTGTGGA AAGGACGATG CACTATCACA GGATTGACTA ACACGCGTTA
1321AGTCgacaat caacctctgg attacaaaat ttgtgaaaga tt

Download FASTA (ORF) (Full)