Construct: ORF TRCN0000474831

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005990.1_s317c1
Derived from:
ccsbBroadEn_05051
DNA Barcode:
ACTGATAGTACCAGCTTAGCAGTC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
SLC16A14 (151473)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474831
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 151473 SLC16A14 solute carrier family 16 me... NM_152527.5 100% 100%
2 human 151473 SLC16A14 solute carrier family 16 me... XM_011510751.3 100% 100%
3 human 151473 SLC16A14 solute carrier family 16 me... XM_017003480.2 100% 100%
4 human 151473 SLC16A14 solute carrier family 16 me... XM_011510752.2 91.5% 91.1% (many diffs)
5 human 151473 SLC16A14 solute carrier family 16 me... XM_005246353.4 90.5% 90.5% 258_259ins144
6 mouse 71781 Slc16a14 solute carrier family 16 (m... NM_027921.1 81.9% 87.1% (many diffs)
7 mouse 71781 Slc16a14 solute carrier family 16 (m... XM_006496551.3 81.9% 87.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1596
ORF length:
1530
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgta taccagtcat gaagatattg ggtatgattt tgaagatggc cccaaagaca
121aaaagacact gaagccccac ccaaacattg atggcggatg ggcttggatg atggtgctct
181cctctttctt tgtgcacatc ctcatcatgg gctcccagat ggccctgggt gtcctcaacg
241tggaatggct ggaagaattc caccagagcc gcggcctgac cgcctgggtc agctccctca
301gcatgggcat caccttgata gtgggccctt tcatcggctt gttcattaac acctgtgggt
361gccgccagac tgcgatcatt ggagggctcg tcaactccct gggctgggtg ttgagtgcct
421atgctgcaaa cgtgcattat ctcttcatta cttttggagt cgcagctggc ctgggcagcg
481ggatggccta cctgccagcg gtggtcatgg tgggcaggta tttccagaag agacgcgccc
541tcgcccaggg cctcagcacc acggggaccg gattcggtac gttcctaatg actgtgctgc
601tgaagtacct gtgcgcagag tacggctgga ggaatgccat gttgatccaa ggtgccgttt
661ccctaaacct gtgtgtttgt ggggcgctca tgaggcccct ctctcctggt aaaaacccaa
721acgacccagg agagaaagat gtgcgtggcc tgccagcgca ctccacagaa tctgtgaagt
781caactggaca gcagggaaga acagaagaga aggatggtgg gctcgggaac gaggagaccc
841tctgcgacct gcaagcccag gagtgccccg atcaggccgg gcacaggaag aacatgtgtg
901ccctccggat tctgaagact gtcagctggc tcaccatgag agtcaggaag ggcttcgagg
961actggtattc gggctacttt gggacagcct ctctatttac aaatcgaatg tttgtagcct
1021ttattttctg ggctttgttt gcatacagca gctttgtcat ccccttcatt cacctcccag
1081aaatcgtcaa tttgtataac ttatcggagc aaaacgacgt tttccctctg acgtcaatta
1141tagcaatagt tcacatcttt ggaaaagtga tcctgGGCGT CATAGCCGAC TTGCCTTGCA
1201TTAGTGTTTG GAATGTCTTC CTGTTGGCCA ACTTCACCCT TGTCCTCAGT ATTTTTATTC
1261TGCCGTTGAT GCACACGTAC GCTGGCCTGG CGGTCATCTG TGCGCTGATA GGGTTTTCCA
1321GTGGTTATTT CTCCCTAATG CCCGTAGTGA CTGAAGACTT GGTTGGCATT GAACACCTGG
1381CCAATGCCTA CGGCATCATC ATCTGTGCTA ATGGCATCTC TGCATTGCTG GGACCACCTT
1441TTGCAGGGTG GATCTATGAC ATCACGCAAA AATATGATTT TTCCTTCTAC ATATGTGGTT
1501TGCTTTACAT GATAGGAATA CTCTTTTTAC TTATTCAGCC GTGCATTCGA ATTATAGAAC
1561AATCCAGAAG AAAATACATG GATGGTGCAC ATGTTTACCC AACTTTCTTG TACAAAGTGG
1621TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
1681CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
1741AACTGATAGT ACCAGCTTAG CAGTCACGCG TTAAGTCgac aatcaacctc tggattacaa
1801aatttgtgaa agatt

Download FASTA (ORF) (Full)

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