Construct: ORF TRCN0000474853

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF001936.1_s317c1
Derived from:
ccsbBroadEn_09370
DNA Barcode:
AGCACGGCACACCGTCACAGTTAT
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
BIRC8 (112401)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000474853
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 331 XIAP X-linked inhibitor of apopt... NM_001167.3 59.2% 55.1% (many diffs)
2 human 331 XIAP X-linked inhibitor of apopt... NM_001204401.1 59.2% 55.1% (many diffs)
3 human 331 XIAP X-linked inhibitor of apopt... XM_006724754.2 59.2% 55.1% (many diffs)
4 human 331 XIAP X-linked inhibitor of apopt... XM_011531329.2 59.2% 55.1% (many diffs)
5 human 112401 BIRC8 baculoviral IAP repeat cont... NR_159880.1 55.1% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1080
ORF length:
1014
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgca tagtgaagaa gctagattac agtcgtttca caactggcca gcctctgccc
121acttgacccc gagagagctg gccagtgctg ggctgtacta cacaggcact gatgaccaag
181tgcagtgctt ctgttgtggc ggaaaactga aaaactggga acctggtgat cgtgcctggt
241cagaacacag gagacatttt cctaattgct tctttatttt gggccacaac gttaatattc
301gaggtgaatc tgatgttgcg agttctgata ggaatttctc aaattcaaca agttctccaa
361ggaatccatc catgacgggt tatgaagccc ggctcattac ttttgggaca tggatgtact
421ccgtcaacaa agagcagctt gcaagagctg gattttatgc tataggtcaa gaggataaag
481tacagtgctt tcactgtgga ggagggctag ccaactggaa gcccaaggaa gatccttggg
541aacagcatgc taaatggtat ccaggttgca aatatcTGCT AGAAGAGAAG GGACATGAAT
601ATATAAACAA CATTCATTTA ACCCGTTCAC TTGAGGGAGC TCTGGTACAA ACTACCAAGA
661AAACACCATC ACTAACTAAA AGAATCAGTG ATACCATCTT CCCTAATCCT ATGCTACAAG
721AAGCTATACG AATGGGATTT GATTTCAAGG ACGTTAAGAA AATAATGGAG GAAAGAATTC
781AAACATCTGG GAGCAACTAT AAAACGCTTG AGGTTCTTGT TGCAGATCTA GTGAGCGCTC
841AGAAAGACAC TACAGAAAAT GAATTGAATC AGACTTCATT GCAGAGAGAA ATCAGCCCTG
901AAGAGCCGCT AAGGCGTCTG CAAGAGGAGA AGCTTTGTAA AATCTGCATG GACAGATATA
961TCGCTGTTGT TTTTATTCCT TGTGGACATC TGGTCACTTG TAAACAATGT GCTGAAGCAG
1021TTGACAGATG TCCCATGTGC AGCGCGGTTA TTGATTTCAA GCAAAGAGTT TTTATGTCTT
1081ACCCAACTTT CTTGTACAAA GTGGTTGATA TCGGTAAGCC TATCCCTAAC CCTCTCCTCG
1141GTCTCGATTC TACGTAGTAA TGAACTAGTC CGTAACTTGA AAGTATTTCG ATTTCTTGGC
1201TTTATATATC TTGTGGAAAG GACGAAGCAC GGCACACCGT CACAGTTATA CGCGTTAAGT
1261Cgacaatcaa cctctggatt acaaaatttg tgaaagatt

Download FASTA (ORF) (Full)

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