Construct: ORF TRCN0000475629

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF005191.1_s317c1
Derived from:
ccsbBroadEn_07156
DNA Barcode:
CCGCTCCCTGAAGGTCCCTATCCC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF37A (7587)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475629
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
n/a

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7587 ZNF37A zinc finger protein 37A NM_001007094.2 99.9% 100% 1440A>G
2 human 7587 ZNF37A zinc finger protein 37A NM_001178101.2 99.9% 100% 1440A>G
3 human 7587 ZNF37A zinc finger protein 37A NM_001324245.2 99.9% 100% 1440A>G
4 human 7587 ZNF37A zinc finger protein 37A NM_001324246.2 99.9% 100% 1440A>G
5 human 7587 ZNF37A zinc finger protein 37A NM_001324247.2 99.9% 100% 1440A>G
6 human 7587 ZNF37A zinc finger protein 37A NM_001324248.2 99.9% 100% 1440A>G
7 human 7587 ZNF37A zinc finger protein 37A NM_001324249.2 99.9% 100% 1440A>G
8 human 7587 ZNF37A zinc finger protein 37A NM_001324250.2 99.9% 100% 1440A>G
9 human 7587 ZNF37A zinc finger protein 37A NM_001324251.2 99.9% 100% 1440A>G
10 human 7587 ZNF37A zinc finger protein 37A NM_003421.3 99.9% 100% 1440A>G
11 human 7587 ZNF37A zinc finger protein 37A XM_011519656.2 99.9% 100% 1440A>G
12 human 7587 ZNF37A zinc finger protein 37A XM_011519657.2 99.9% 100% 1440A>G
13 human 7587 ZNF37A zinc finger protein 37A XM_011519658.3 99.9% 100% 1440A>G
14 human 7587 ZNF37A zinc finger protein 37A XM_005252586.4 83.8% 83.9% 0_1ins270;1170A>G
15 human 7587 ZNF37A zinc finger protein 37A XM_017016618.1 83.8% 83.9% 0_1ins270;1170A>G
16 human 7587 ZNF37A zinc finger protein 37A XM_017016619.1 83.8% 83.9% 0_1ins270;1170A>G
17 human 7587 ZNF37A zinc finger protein 37A NM_001324252.1 19.2% 16% (many diffs)
18 human 7587 ZNF37A zinc finger protein 37A NM_001324253.1 19.2% 16% (many diffs)
19 human 7587 ZNF37A zinc finger protein 37A NM_001324254.1 19.2% 16% (many diffs)
20 human 100129482 ZNF37BP zinc finger protein 37B, ps... NR_026777.2 18.1% (many diffs)
21 human 7587 ZNF37A zinc finger protein 37A NM_001324256.2 16.5% 15.5% (many diffs)
22 human 7587 ZNF37A zinc finger protein 37A NM_001324257.2 16.5% 15.5% (many diffs)
23 human 7587 ZNF37A zinc finger protein 37A NM_001324258.2 16.5% 15.5% (many diffs)
24 human 7587 ZNF37A zinc finger protein 37A XM_017016621.1 16.5% 15.5% (many diffs)
25 human 7587 ZNF37A zinc finger protein 37A NM_001324259.2 16.2% 14.5% (many diffs)
26 human 7587 ZNF37A zinc finger protein 37A NM_001324260.2 16.2% 14.5% (many diffs)
27 human 7587 ZNF37A zinc finger protein 37A XM_017016622.1 16.2% 14.5% (many diffs)
28 human 7587 ZNF37A zinc finger protein 37A XM_017016624.1 14.6% 14.4% (many diffs)
29 human 7587 ZNF37A zinc finger protein 37A NM_001324261.2 14.4% 14% (many diffs)
30 human 7587 ZNF37A zinc finger protein 37A NM_001324262.2 14.4% 14% (many diffs)
31 human 7587 ZNF37A zinc finger protein 37A XM_017016623.1 14.4% 14% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
1749
ORF length:
1683
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgat cacatcccag ggatcagtgt cgtttaggga tgtgactgtg ggcttcactc
121aagaggagtg gcagcatctg gaccctgctc agaggaccct gtacagggat gtgatgctgg
181agaactacag ccaccttgtc tcagtagggt attgcattcc taaaccagaa gtgattctca
241agttggagaa aggcgaggag ccatggatat tagaggaaaa atttccaagc cagagtcatc
301tggaattaat taataccagt agaaactatt caataatgaa gttcaatgag tttaacaaag
361gtggaaaatg tttctgtgat gaaaagcatg aaataattca ttctgaagag gaaccttctg
421aatataataa aaatgggaac agcttctggc tgaatgaaga cctcatttgg catcagaaaa
481ttaaaaattg ggaacaatct tttgaataca atgaatgtgg gaaagctttc cctgagaatt
541cactcttcct tgtacataag agaggttaca caggacagaa aacctgcaaa tatactgaac
601atgggaaaac ctgtgatatg tcatttttca tcactcatca gcaaacacat ccaagagaaa
661accactatgg taatgaatgt ggagaaaata tctttgagga atccattctc cttgaacatc
721agagtgttta cccattcagc cagaagttaa atctcactcc aattcagaga acccactcaa
781ttaacaatat tattgaatat aatgagtgtg gaacattttt cagtgaaaaa ttagtccttc
841atttacaaca gagaacacat acaggagaaa aaccttatga atgtcatgaa tgtggaaaaa
901ccttcaccca gaagtcagcc cacacaagac atcagagaac acacacaggg ggaaaaccct
961atgaatgtca tgaatgtggg aagaccttct ataagaattc agacctcatt aaacatcaaa
1021gaattcatac aggggagaga ccttatggat gtcatgaatg tgggaaatcc ttcagtgaaa
1081agtcaaccct tactcaacat caaagaacgc acacagggga gaaaccatat gaatgtcatg
1141aatgtgggaa aaccttctca tttaagtcag tccttactgt gcatcagaaa acacacacag
1201gggagaagcc ctatgaatgc tatgcatgtg ggaaagcctt tctcagaaaa tcagacctca
1261ttaaacatca aagaatacac acaggtgaaa aaccttatga atgtaatgaa tgtgggaagt
1321cattctctga gaagtcaacc cttactaaac atctaagaac tcacacaggt gagaaacctt
1381atgaatgtat tcagtgtgga aaatttttct gctactactc cggtttcaca gaacatctga
1441gaagacacac aggggagaaa ccttttggat gtaatgaatg tgggaaaaCC TTCCGTCAGA
1501AGTCGGCCCT AATTGTTCAC CAGAGAACTC ATATAAGACA GAAACCCTAT GGATGTAATC
1561AATGTGGAAA ATCATTCTGT GTGAAGTCAA AACTCATTGC ACATCATAGA ACACACACAG
1621GGGAGAAACC CTATGAATGT AATGTTTGTG GAAAATCATT CTATGTTAAG TCAAAACTAA
1681CTGTACATCA GAGAATACAC TTGGGGAGAA ACCCTATAAA TGTAGTAAAC GAGGGAAATT
1741ACTCTGGGTG CCCAACTTTC TTGTACAAAG TGGTTGATAT CGGTAAGCCT ATCCCTAACC
1801CTCTCCTCGG TCTCGATTCT ACGTAGTAAT GAACTAGTCC GTAACTTGAA AGTATTTCGA
1861TTTCTTGGCT TTATATATCT TGTGGAAAGG ACGACCGCTC CCTGAAGGTC CCTATCCCAC
1921GCGTTAAGTC gacaatcaac ctctggatta caaaatttgt gaaagatt

Download FASTA (ORF) (Full)