Construct: ORF TRCN0000475845

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF010267.1_s317c1
Derived from:
ccsbBroadEn_09947
DNA Barcode:
ACATCCATTCGCTTTCGACAGAAA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR4N4 (283694)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000475845
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 283694 OR4N4 olfactory receptor family 4... NM_001005241.3 99.5% 100% (many diffs)
2 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_011546222.1 99.4% 99% (many diffs)
3 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_011546224.2 99.4% 99% (many diffs)
4 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_017030115.1 99.4% 99% (many diffs)
5 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_017030116.1 99.4% 99% (many diffs)
6 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_017030117.1 99.4% 99% (many diffs)
7 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_017030118.1 99.4% 99% (many diffs)
8 human 105369274 LOC105369274 olfactory receptor 4N4 NM_001365389.1 94.6% 94.5% 1_51del;438T>C;828A>G
9 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_011546215.2 94.3% 93.9% (many diffs)
10 human 390429 OR4N2 olfactory receptor family 4... NM_001004723.3 87.8% 83.2% (many diffs)
11 human 390539 OR4N3P olfactory receptor family 4... NR_028067.1 87.6% (many diffs)
12 human 390437 OR4N5 olfactory receptor family 4... NM_001004724.1 83.4% 81.6% (many diffs)
13 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_011546201.1 78.9% 78.6% (many diffs)
14 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_011546205.1 78.9% 78.6% (many diffs)
15 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_011546206.1 78.9% 78.6% (many diffs)
16 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_017030114.1 78.9% 78.6% (many diffs)
17 human 102723532 LOC102723532 olfactory receptor 4N4-like XM_024452500.1 78.9% 78.6% (many diffs)
18 human 101927079 LOC101927079 uncharacterized LOC101927079 NR_110481.1 23% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1017
ORF length:
948
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gaagatagca aacaacacag tagtgacaga atttatcctc cttggtctga
121ctcagtctca agatattcag ctcttggtct ttgtgctgat cttaattttc taccttatca
181tcctccctgg aaattttctc attattttca ccataaggtc agaccctggg ctcacagccc
241ccctctattt atttctgggc aacttggcct tcctggatgc atcctactcc ttcattgtgg
301ctcccaggat gttggtggac ttcctctctg agaagaaggt aatctcctac agaggctgca
361tcactcagct ctttttcttg cacttccttg gaggagggga gggattactc cttgttgtga
421tggcctttga ccgctacatc gccatctgcc ggcccctgca ctgttcaact gtcatgaacc
481ctagagcctg ctatgcaatg atgttggctc tgtggcttgg gggttttgtc cactccatta
541tccaggtggt cctcatcctc cgcttgcctt tttgtggccc aaaccagctg gacaacttct
601tctgtgatgt ccgacaggtc atcaagctgg cttgcaccga catgtttgtg gtggagcttc
661tgatggtctt caacagtggc ctgatgacac tcctgtgctt tctggggctt ctggcttcct
721atgcagtcat ccTCTGCCAT GTTCGTAGGG CAGCTTCTGA AGGGAAGAAC AAGGCCATGT
781CCACATGCAC CACTCGTGTC ATTATTATAC TTCTTATGTT TGGACCTGCT ATCTTCATCT
841ACATGTGCCC TTTCAGGGCC TTACCAGCTG ACAAGATGGT TTCTCTCTTT CACACAGTGA
901TCTTTCCATT GATGAATCCT ATGATTTATA CCCTTCGCAA CCAGGAAGTG AAAACTTCCA
961TGAAGAGGTT ATTGAGTCGA CATGTAGTCT GTCAAGTGGA TTTTATAATA AGAAACTTGC
1021CAACTTTCTT GTACAAAGTG GTTGATATCG GTAAGCCTAT CCCTAACCCT CTCCTCGGTC
1081TCGATTCTAC GTAGTAATGA ACTAGTCCGT AACTTGAAAG TATTTCGATT TCTTGGCTTT
1141ATATATCTTG TGGAAAGGAC GAACATCCAT TCGCTTTCGA CAGAAAACGC GTTAAGTCga
1201caatcaacct ctggattaca aaatttgtga aagatt

Download FASTA (ORF) (Full)