Construct: ORF TRCN0000476174

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF012333.1_s317c1
Derived from:
ccsbBroadEn_08034
DNA Barcode:
CTCAACAGGGGAATCCGTTACGGA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
OR7A5 (26659)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476174
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 26659 OR7A5 olfactory receptor family 7... NM_001370480.1 99.8% 100% 438A>G
2 human 26659 OR7A5 olfactory receptor family 7... NM_001370481.1 99.8% 100% 438A>G
3 human 26659 OR7A5 olfactory receptor family 7... NM_001370482.1 99.8% 100% 438A>G
4 human 26659 OR7A5 olfactory receptor family 7... NM_001370483.1 99.8% 100% 438A>G
5 human 26659 OR7A5 olfactory receptor family 7... NM_017506.2 99.8% 100% 438A>G
6 human 390892 OR7A10 olfactory receptor family 7... NM_001005190.1 84.6% 78% (many diffs)
7 human 26333 OR7A17 olfactory receptor family 7... NM_030901.1 84.1% 77.4% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1026
ORF length:
957
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggaaccagga aatgatacac aaatttcaga atttcttctt ctgggatttt
121cacaagaacc tggactgcaa cccttcctct ttgggctgtt cctgtccatg tacctggtca
181ctgtgctcgg gaacctgctc atcatcctgg ccacaatctc agactcccac ctccacaccc
241ccatgtactt cttcctctcc aacctgtcct ttgctgacat ttgtgttact tccaccacca
301ttccaaaaat gctgatgaac atccagacac agaacaaagt catcacctac atagcctgcc
361tcatgcagat gtattttttc atactctttg ctggatttga aaacttcctc ctgtccgtga
421tggcctatga ccggtttgtg gccatctgtc accccctgca ctacatggtc attatgaacc
481ctcacctctg tggactgctg gttctggcat cctggaccat gagtgctctg tattccttgc
541tacaaatctt aatggtagta cggctgtcct tctgcacagc cttagaaatc ccccactttt
601tctgtgaact taatcaggtc atccaacttg cttgttctga tagctttctt aatcacatgg
661tgatatattt tacagttgcg ctgctgggtg gaggtcccct gactgggaTC CTTTACTCTT
721ACTCTAAGAT AATTTCTTCC ATACATGCAA TCTCATCAGC TCAGGGGAAG TACAAGGCAT
781TTTCCACCTG TGCATCTCAC CTCTCAGTTG TCTCCTTATT TTATGGTGCA ATCCTAGGGG
841TGTACCTTAG TTCTGCTGCC ACCCGCAACT CACACTCAAG TGCAACAGCC TCAGTGATGT
901ACACTGTGGT CACCCCCATG CTGAACCCCT TTATCTATAG TCTGAGGAAT AAAGACATAA
961AGAGGGCTCT GGGAATACAT TTGTTGTGGG GAACAATGAA AGGGCAATTT TTCAAGAAGT
1021GCCCATTGCC AACTTTCTTG TACAAAGTGG TTGATATCGG TAAGCCTATC CCTAACCCTC
1081TCCTCGGTCT CGATTCTACG TAGTAATGAA CTAGTCCGGA ACTTGAAAGT ATTTCGATTT
1141CTTGGCTTTA TATATCTTGT GGAAAGGACG ACTCAACAGG GGAATCCGTT ACGGAACGCG
1201TTAAGTCgac aatcaacctc tggattacaa aatttgtgaa agatt

Download FASTA (ORF) (Full)