Construct: ORF TRCN0000476554

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF003301.1_s317c1
Derived from:
ccsbBroadEn_07464
DNA Barcode:
CCACGAACTAGCCATATCATCTGC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
PHF14 (9678)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476554
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 9678 PHF14 PHD finger protein 14 NM_014660.4 99.8% 99.8% 344A>G;678G>A;1428T>C
2 human 9678 PHF14 PHD finger protein 14 NM_001007157.2 93.4% 93.2% (many diffs)
3 human 9678 PHF14 PHD finger protein 14 NR_033436.2 67.1% (many diffs)
4 human 9678 PHF14 PHD finger protein 14 NR_033435.2 19.6% (many diffs)
5 mouse 75725 Phf14 PHD finger protein 14 XM_006505200.3 90.7% 96.2% (many diffs)
6 mouse 75725 Phf14 PHD finger protein 14 NM_029404.3 90.5% 96% (many diffs)
7 mouse 75725 Phf14 PHD finger protein 14 XM_006505199.3 89.8% 95.2% (many diffs)
8 mouse 75725 Phf14 PHD finger protein 14 XM_006505198.3 88.7% 94% (many diffs)
9 mouse 75725 Phf14 PHD finger protein 14 XM_011241085.2 85.7% 90.8% (many diffs)
10 mouse 75725 Phf14 PHD finger protein 14 NM_001168382.1 84.8% 89.8% (many diffs)
11 mouse 75725 Phf14 PHD finger protein 14 XM_006505196.3 84.4% 89.4% (many diffs)
12 mouse 75725 Phf14 PHD finger protein 14 XM_006505197.3 84.4% 89.4% (many diffs)
13 mouse 75725 Phf14 PHD finger protein 14 XR_377294.3 71.6% (many diffs)
14 mouse 75725 Phf14 PHD finger protein 14 XR_377293.3 70.4% (many diffs)
15 mouse 75725 Phf14 PHD finger protein 14 XR_001785183.1 67.8% (many diffs)
16 mouse 75725 Phf14 PHD finger protein 14 XM_017321821.1 62.1% 65.6% (many diffs)
17 mouse 75725 Phf14 PHD finger protein 14 XM_017321819.1 58% 61.1% (many diffs)
18 mouse 75725 Phf14 PHD finger protein 14 XM_017321820.1 58% 61.1% (many diffs)
19 mouse 75725 Phf14 PHD finger protein 14 XM_006505201.3 57.7% 60.8% (many diffs)
20 mouse 75725 Phf14 PHD finger protein 14 XM_006505202.3 57.7% 60.8% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2733
ORF length:
2664
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggatcgcagc tccaagagga ggcaggtgaa gcctttggca gcttctctgc
121tggaagctct tgattatgat agttcagatg acagtgattt taaagttgga gatgcctcag
181attctgaagg gagtggtaat ggaagtgaag atgcttcaaa ggacagtgga gaaggttcct
241gtagtgattc tgaagaaaat attttagaag aagaactgaa tgaagatatt aaagtaaaag
301aagaacaact taaaaattct gcagaggaag aagtactatc atcagaaaaa caattaatta
361aaatggaaaa gaaggaagaa gaagaaaatg gagaaagacc tagaaagaaa agggagaaag
421agaaggaaaa agaaaaggaa aaggagaaag agaaggaaag agagaaggaa aaagaaaaag
481caacagtatc tgagaatgtg gctgcttctg ctgctgccac cacaccagcc acaagtcctc
541ctgctgttaa cacatcccct tctgttccca ctacgacaac cgctacagag gaacaagtca
601gcgagccaaa aaaatggaac cttcgacgaa accgaccact tctggatttt gtgtccatgg
661aagagctgaa tgacatggat gactatgaca gtgaggatga caatgattgg cgacctactg
721tagtaaagag aaaagggaga tctgcatctc agaaagaggg aagtgatgga gacaatgagg
781atgatgaaga tgagggaagc gggagtgatg aagacgagaa tgatgaaggc aatgatgaag
841atcatagtag ccctgccagt gaagggggtt gcaagaagaa gaagagtaaa gttcttagca
901gaaacagtgc tgatgatgag gaactgacca atgatagcct gaccctatct caaagcaaga
961gtaatgagga ctcgctgatt cttgagaaga gtcaaaactg gagctctcaa aaaatggacc
1021atattctgat ttgctgtgtt tgtctgggag ataatagtga ggacgctgat gaaataattc
1081agtgtgacaa ttgtggcatt acagtccatg aaggttgtta tggagttgat ggagagagtg
1141actctattat gagttcagct tctgaaaact ccactgaacc ttggttttgt gatgcctgta
1201aatgtggtgt ttctcctagc tgtgaactgt gtcctaatca ggatggaatt ttcaaggaga
1261cagatgctgg aagatgggtt catattgttt gtgccctgta tgttcctgga gtagcctttg
1321gagatattga caaattacga ccagtaacac taacggaaat gaactattcc aaatatggtg
1381ccaaggagtg tagcttttgt gaagaccctc gctttgctag aactggggtt tgcattagct
1441gtgatgcagg gatgtgcaga gcctatttcc atgtgacctg tgctcaaaag gaaggcctgc
1501tttcagaggc agcggcggaa gaggatatag cagatccatt ctttgcttat tgtaagcaac
1561atgcagatag gttagacaga aagtggaaga gaaaaaacta cttggctcta cagtcctatt
1621gtaaaatgtc tttgcaagag agagagaagc aactatcacc agaagcacag gcaaggatca
1681atgcccggct tcagcagtat cgtgccaaag cagaactagc tcgatctacc agaccccagg
1741cctgggttcc aagggaaaaa ttgcccagac cactcaccag cagtgcttca gctattcgta
1801aacttatgcg gaaagcagaa ctcatgggga tcagtacaga tatctttcca gtggacaatt
1861cagatactag ttctagtgtg gatggaagga gaaaacataa gcaaccagct ctcactgcag
1921attttgtgaa ttattatttt gagagaaata tgcgcatgat tcaaattcag gaaaatatgg
1981ctgaacaaaa gaatataaaa gataaattag agaatgaaca agaaaagctt catgtagaat
2041ataataagct atgtgaatct ttagaagaac tacaaaacct gaatggaaaa cttcgaagtg
2101aaggacaagg aatatgggct ttactaggca gaatcacagg gcagaagttg aatataccgg
2161caattttgcg agcacccaag gagagaaaac caagtaaaaa agaaggaggc acacaaaaga
2221catctactct tcctgcagta ctttatagtt gtgggatttg taagaagaac catgatcagc
2281atcttctttt attgtgtgat acctgtaaac tacattacca tcttGGATGT CTGGATCCTC
2341CTCTTACAAG GATGCCAAGA AAGACCAAAA ACAGTTATTG GCAGTGCTCG GAATGTGACC
2401AGGCAGGGAG CAGTGACATG GAAGCAGATA TGGCCATGGA AACCCTACCA GATGGAACCA
2461AACGATCAAG GAGGCAGATT AAGGAACCAG TGAAATTTGT TCCACAGGAT GTGCCACCAG
2521AACCCAAGAA GATTCCGATA AGAAACACGA GAACCAGAGG ACGAAAACGA AGCTTCGTTC
2581CTGAGGAAGA AAAACATGAG GAAAGAGTTC CTAGAGAGAG AAGACAAAGA CAGTCTGTGT
2641TGCAAAAGAA GCCCAAGGCT GAAGATTTAA GAACTGAATG TGCAACTTGC AAGGGAACTG
2701GAGACAATGA AAATCTTGTC AGATACCCTT CATTGCCAAC TTTCTTGTAC AAAGTGGTTG
2761ATATCGGTAA GCCTATCCCT AACCCTCTCC TCGGTCTCGA TTCTACGTAG TAATGAACTA
2821GTCCGTAACT TGAAAGTATT TCGATTTCTT GGCTTTATAT ATCTTGTGGA AAGGACGACC
2881ACGAACTAGC CATATCATCT GCACGCGTTA AGTCgacaat caacctctgg attacaaaat
2941ttgtgaaaga tt

Download FASTA (ORF) (Full)