Construct: ORF TRCN0000476630

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF013567.1_s317c1
Derived from:
ccsbBroadEn_02687
DNA Barcode:
AGGGAACATCTGTCAGTAAATACC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
COPG1 (22820)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476630
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 22820 COPG1 COPI coat complex subunit g... NM_016128.4 100% 100%
2 human 22820 COPG1 COPI coat complex subunit g... XM_011512549.2 60.6% 58.1% (many diffs)
3 mouse 54161 Copg1 coatomer protein complex, s... NM_017477.2 89.1% 97.2% (many diffs)
4 mouse 54161 Copg1 coatomer protein complex, s... XR_001785155.1 56.1% (many diffs)
5 mouse 54161 Copg1 coatomer protein complex, s... NM_201244.1 12.5% 12.2% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
66
ORF end:
2688
ORF length:
2622
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcatgtt gaagaaattc gacaagaagg atgaggagtc aggtggaggc tccaacccat
121tccagcacct tgagaagagt gcggtactcc aggaggcccg tgtatttaat gaaactccca
181tcaaccctcg gaaatgtgcc cacatcctca ccaagattct ttatctcata aaccaggggg
241agcacctggg gaccacggaa gcgaccgagg ccttctttgc catgaccaag ctctttcagt
301ccaatgatcc cacactccgt cggatgtgct acttgaccat caaggagatg tcttgcattg
361cagaggatgt catcattgtc accagcagcc taacaaaaga catgactggg aaagaagaca
421actaccgggg cccggccgtg cgagccctct gccagatcac tgatagcacc atgctgcagg
481ctattgagcg ctacatgaaa caagccattg tggacaaggt gcccagtgtc tccagctctg
541ccctcgtgtc ttccttgcac ctgctgaagt gcagctttga cgtggtcaag cgctgggtga
601atgaggctca ggaggcagca tccagtgata acatcatggt ccagtaccac gcactagggc
661tcctgtacca tgtgcgtaag aatgaccgcc tagccgtcaa taagatgatc agcaaggtca
721cacggcatgg ccttaagtct ccctttgcct actgcatgat gatccgggtg gccagcaagc
781agctggaaga ggaggatggc agccgtgaca gcccactgtt tgacttcatc gagagctgct
841tgcgcaacaa gcacgagatg gtggtgtatg aagccgcctc ggccatcgtc aatctgccag
901gctgcagtgc caaagagctg gccccggctg tgtcagtgct ccagcttttc tgcagctcac
961ccaaggctgc tctccgctat gctgctgttc gtaccctcaa taaggttgcc atgaagcatc
1021cgtcagctgt gacagcttgt aatctggatc tggagaacct ggtcacagat tcaaaccgca
1081gcattgccac gctggccatc accaccctcc ttaagacggg cagcgagagc agcatcgacc
1141gcctcatgaa gcagatctcc tccttcatgt cagaaatctc ggatgaattc aaggtggtgg
1201ttgtccaggc catcagtgcc ctgtgtcaga aatatcctcg caaacacgcc gtccttatga
1261acttcctgtt caccatgctg cgggaagagg gtggctttga gtataagcgc gctatcgtgg
1321actgcatcat cagcatcatt gaagagaact cagagagcaa ggagacaggg ctgtcacatc
1381tgtgcgagtt catcgaggac tgcgagttca cagtgctggc cacccgtatt ctacatctcc
1441tgggccagga ggggcccaag accaccaatc cctcaaagta catccgcttc atctataacc
1501gagtggtctt ggagcatgag gaggtccggg caggtgctgt gagtgctctg gcgaagtttg
1561gagcccagaa tgaagagatg ttacccagta tcttggtgtt gctgaagagg tgtgtgatgg
1621atgatgacaa tgaagtaagg gaccgagcca ccttctacct aaatgtcctg gagcagaagc
1681agaaggccct taatgcaggc tatatcctaa atggtctgac tgtgtccatc cctggtctgg
1741agagggctct gcagcagtac actctagaac catcagaaaa accttttgac ctcaagtctg
1801tgcccctggc cacggcgccc atggcagagc agagaacaga aagtaccccc atcacagcag
1861tcaaacagcc tgagaaagtg gcagctacca ggcaggagat cttccaggag cagttggcag
1921cagtgccaga gttccgcggt cttgggcccc tcttcaagtc ctcgcctgag cccgtggccc
1981tcaccgagtc agagacggag tatgtcatcc gctgcaccaa acacaccttc accaaccaca
2041tggtttttca gtttgactgc acaaacacac tcaatgacca gaccttggag aatgtcacag
2101tgcagatgga gcccactgag gcctatgagg tgctctgtta cgtgcctgcc cggagcctgc
2161cctacaacca gcccgggacc tgctacacac tggtggcact gcccaaagaa gaccccacag
2221ctgtggcctg cacattcagc tgcatgatga agttcactgt caaggactgt gaTCCCACCA
2281CTGGGGAGAC TGATGACGAA GGCTATGAGG ATGAGTATGT GCTGGAAGAT CTGGAAGTTA
2341CTGTAGCTGA TCACATTCAA AAGGTCATGA AACTGAACTT CGAAGCAGCC TGGGATGAGG
2401TAGGGGATGA ATTTGAGAAG GAGGAAACGT TCACCTTGTC TACCATCAAG ACACTTGAAG
2461AGGCTGTGGG TAATATTGTG AAGTTCTTGG GAATGCACCC TTGTGAGAGG TCAGACAAAG
2521TGCCGGATAA CAAGAACACC CACACGTTGC TCCTGGCTGG TGTGTTCCGG GGTGGTCATG
2581ACATCCTGGT GCGCTCCCGG CTGCTGCTTT TGGACACAGT GACAATGCAG GTGACAGCCA
2641GAAGTTTGGA GGAGCTGCCA GTAGACATCA TCTTGGCATC TGTGGGATAC CCAACTTTCT
2701TGTACAAAGT GGTTGATATC GGTAAGCCTA TCCCTAACCC TCTCCTCGGT CTCGATTCTA
2761CGTAGTAATG AACTAGTCCG TAACTTGAAA GTATTTCGAT TTCTTGGCTT TATATATCTT
2821GTGGAAAGGA CGAAGGGAAC ATCTGTCAGT AAATACCACG CGTTAAGTCg acaatcaacc
2881tctggattac aaaatttgtg aaagatt

Download FASTA (ORF) (Full)