Construct: ORF TRCN0000476823

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF018413.1_s317c1
Derived from:
ccsbBroadEn_12735
DNA Barcode:
GGTCTGTTTCACTGTGTGTTTTTA
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
TCF7L1 (83439)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000476823
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 83439 TCF7L1 transcription factor 7 like 1 NM_031283.3 99.7% 99.6% 22_24delGGC;1597G>A
2 human 83439 TCF7L1 transcription factor 7 like 1 XM_006712109.2 99.6% 99.4% 22_24delGGC;656_658delCAG;1600G>A
3 mouse 21415 Tcf7l1 transcription factor 7 like... NM_009332.3 89.8% 95.9% (many diffs)
4 mouse 21415 Tcf7l1 transcription factor 7 like... NM_001079822.2 87.7% 93.6% (many diffs)
5 mouse 21415 Tcf7l1 transcription factor 7 like... XM_006505882.1 66.2% 71% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
1830
ORF length:
1761
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gccccagctc ggcggcgggg gcggcggcgg cggcggcagc gggggaggcg
121gcggctccag cgccggggcg gccggcggag gggacgacct cggggcgaac gacgagctga
181tccccttcca ggacgagggg ggcgaggagc aggagccgag cagcgatagc gcctcggcgc
241agcgggacct agacgaggtc aagtcgtccc tggtcaacga gtcggagaac cagagcagca
301gctcggactc ggaggcggag aggcgcccgc agcccgtccg ggacactttc cagaagccgc
361gggactattt cgccgaagtg agaaggcctc aggacagcgc gttctttaaa ggacccccgt
421accctgggta ccccttcctg atgatcccgg acctgagcag cccgtacctc tccaacggac
481ccctgtctcc cggaggagcg cgcacctacc tgcagatgaa atggcccctc ctcgatgtcc
541cctccagcgc cacagtcaag gacacgaggt caccatctcc agcacacttg tctaataaag
601ttcctgtcgt tcagcacccg catcacatgc atccgctgac tcccctcatc acctacagca
661atgaccactt ctcccccggc tcccctccca cccacctctc cccagagatc gatccaaaga
721caggaatccc ccggccccct cacccatccg agctgtcacc gtattaccca ctctctcccg
781gagctgtcgg acaaatcccc caccccctcg gctggctcgt cccacagcaa ggccagccca
841tgtactccct tcctcccggt ggcttccggc acccttaccc cgccctcgcc atgaacgcct
901cgatgtccag cctggtctcc agtcggttct ctcctcacat ggtggctcct gcccaccctg
961gcctgcccac ctcagggatc ccccaccctg ccatcgtctc ccccatcgtc aagcaggaac
1021cggcaccccc cagcctgagc cctgcagtga gcgtgaaatc accagtcacc gtgaaaaagg
1081aggaggaaaa gaagccccac gtgaagaagc ctctgaatgc cttcatgttg tatatgaagg
1141agatgagggc caaggtggtg gctgagtgca ccctgaagga aagtgcagcc attaaccaga
1201tccttggaag aaagtggcac aacctgtctc gagaagaaca ggccaagtac tacgagctgg
1261cccggaagga gcggcagctt cactcgcagc tctacccaac ctggtcagcc cgggacaact
1321atggtaagaa aaagaagagg aagagagaaa agcagctgtc ccagacacag tcacagcagc
1381aagtccagga ggcagagggt gccctggcct ccaagagcaa gaagccatgt gttcagtacc
1441tgccccccga gaagccctgt gacagccctg cctcctccca cgggagcatg ctggactccc
1501cggccactcc ctctgcagct ttggcctcac cagctgcccc tgctgccacc cattcggagc
1561aagcccagcc cctctccctc accaccaaac cagaaacccg ggcccagctg gctctccacT
1621CTGCCGCCTT CCTGTCGGCT AAGGCTGCAG CCTCCTCCTC TAGGCAGATG GGCAGCCAGC
1681CTCCCCTCCT GTCCCGGCCC CTCCCCCTTG GGTCCATGCC CACAGCTCTG CTGGCCTCTC
1741CCCCGTCCTT CCCCGCCACG CTCCATGCCC ACCAGGCCCT CCCGGTGCTA CAGGCCCAGC
1801CTCTTTCCCT GGTCACCAAG TCTGCCCACT TGCCAACTTT CTTGTACAAA GTGGTTGATA
1861TCGGTAAGCC TATCCCTAAC CCTCTCCTCG GTCTCGATTC TACGTAGTAA TGAACTAGTC
1921CGTAACTTGA AAGTATTTCG ATTTCTTGGC TTTATATATC TTGTGGAAAG GACGAGGTCT
1981GTTTCACTGT GTGTTTTTAA CGCGTTAAGT Cgacaatcaa cctctggatt acaaaatttg
2041tgaaagatt

Download FASTA (ORF) (Full)