Construct: ORF TRCN0000477157

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF004657.1_s317c1
Derived from:
ccsbBroadEn_13635
DNA Barcode:
GACCCTGATCACACCATGCTACCG
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ANKRD36 (375248)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000477157
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 375248 ANKRD36 ankyrin repeat domain 36 NM_198555.4 52.6% 52.4% 486_487insT;489_489delAins438
2 human 57730 ANKRD36B ankyrin repeat domain 36B NM_001353337.2 47.8% 46.9% (many diffs)
3 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511557.3 34% 29.7% (many diffs)
4 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511558.2 34% 29.7% (many diffs)
5 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511555.2 33.6% 29.4% (many diffs)
6 human 57730 ANKRD36B ankyrin repeat domain 36B XM_011511556.2 33.6% 29.4% (many diffs)
7 human 57730 ANKRD36B ankyrin repeat domain 36B XR_002959321.1 23% (many diffs)
8 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004584.2 22% 19.4% (many diffs)
9 human 375248 ANKRD36 ankyrin repeat domain 36 XM_011511131.1 21.8% 20.5% (many diffs)
10 human 57730 ANKRD36B ankyrin repeat domain 36B XR_001738869.2 21.6% (many diffs)
11 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004580.2 21.1% 19% (many diffs)
12 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004581.2 21.1% 18.8% (many diffs)
13 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004579.2 20.9% 18.4% (many diffs)
14 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004582.2 20.9% 18.4% (many diffs)
15 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004578.2 20.4% 18% (many diffs)
16 human 57730 ANKRD36B ankyrin repeat domain 36B NM_025190.3 20.4% 17.9% (many diffs)
17 human 57730 ANKRD36B ankyrin repeat domain 36B XM_005263995.5 20.4% 17.9% (many diffs)
18 human 57730 ANKRD36B ankyrin repeat domain 36B XM_006712661.2 20.4% 17.9% (many diffs)
19 human 375248 ANKRD36 ankyrin repeat domain 36 XR_001738741.1 19.3% (many diffs)
20 human 57730 ANKRD36B ankyrin repeat domain 36B XM_017004583.2 17.2% 15.2% (many diffs)
21 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004044.1 16.9% 15.9% (many diffs)
22 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004045.1 16.9% 15.9% (many diffs)
23 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004039.1 16.6% 15.6% (many diffs)
24 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004040.1 16.6% 15.6% (many diffs)
25 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004041.1 16.6% 15.6% (many diffs)
26 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004043.1 16.6% 15.6% (many diffs)
27 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004025.1 16.3% 15.3% (many diffs)
28 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004026.1 16.3% 15.3% (many diffs)
29 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004027.1 16.3% 15.3% (many diffs)
30 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004028.1 16.3% 15.3% (many diffs)
31 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004030.1 16.3% 15.3% (many diffs)
32 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004031.1 16.3% 15.3% (many diffs)
33 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004032.1 16.3% 15.3% (many diffs)
34 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004033.1 16.3% 15.3% (many diffs)
35 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004034.1 16.3% 15.3% (many diffs)
36 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004035.1 16.3% 15.3% (many diffs)
37 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004036.1 16.3% 15.3% (many diffs)
38 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004037.1 16.3% 15.3% (many diffs)
39 human 375248 ANKRD36 ankyrin repeat domain 36 XM_024452877.1 16.3% 15.3% (many diffs)
40 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004015.1 16% 15% (many diffs)
41 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004011.1 16% 15% (many diffs)
42 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004012.1 16% 15% (many diffs)
43 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004013.1 16% 15% (many diffs)
44 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004014.1 16% 15% (many diffs)
45 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004016.1 16% 15% (many diffs)
46 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004017.1 16% 15% (many diffs)
47 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004018.1 16% 15% (many diffs)
48 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004019.1 16% 15% (many diffs)
49 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004020.1 16% 15% (many diffs)
50 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004021.1 16% 15% (many diffs)
51 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004022.1 16% 15% (many diffs)
52 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004023.1 16% 15% (many diffs)
53 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004010.1 15.7% 14.8% (many diffs)
54 human 375248 ANKRD36 ankyrin repeat domain 36 NM_001354587.1 15.7% 14.8% (many diffs)
55 human 375248 ANKRD36 ankyrin repeat domain 36 XM_006712514.3 15.7% 14.8% (many diffs)
56 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004009.1 15.7% 14.8% (many diffs)
57 human 57730 ANKRD36B ankyrin repeat domain 36B XR_922976.2 14.9% (many diffs)
58 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959292.1 14.6% (many diffs)
59 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959293.1 13.9% (many diffs)
60 human 375248 ANKRD36 ankyrin repeat domain 36 XM_017004024.1 13.3% 12.3% (many diffs)
61 human 400986 ANKRD36C ankyrin repeat domain 36C NM_001310154.3 13.1% 11.2% (many diffs)
62 human 375248 ANKRD36 ankyrin repeat domain 36 XR_002959294.1 10% (many diffs)
63 human 375248 ANKRD36 ankyrin repeat domain 36 XR_922917.2 8.7% (many diffs)
64 human 375248 ANKRD36 ankyrin repeat domain 36 XR_001738739.2 8.2% (many diffs)
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Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
996
ORF length:
927
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat ggaagacggc aagcgggaga ggtggcccac cctcatggag cgcttgtgct
121cggatggctt cgcatttccc caatacccca ttaaaccgta tcatctgaag aggatccaca
181gagctgtctt acatggtaat ctagagaaac tgaagtacct tctgctcacg tattatgacg
241ccaataagag agacaggaag gaaaggaccg ccctacattt ggcctgtgcc actggccaac
301cggaaatggt acatctcctg gtgtccagaa gatgtgagct taacctctgc gaccgtgaag
361acaggacacc tctgatcaag gctgtacaac tgaggcagga ggcttgtgca actcttctgc
421tgcaaaatgg cgccaatcca aatattacgg atttctttgg aaggactgct ctgcactacg
481ctgtgtataa tgaagataca tccatgatag aaaaacttct ttcacatggt acaaatattg
541aagaatgcag caagtgtgaa taTCAGCCAC TGTTATTTGC TGTGAGTCGA AGAAAAGTGA
601AAATGGTGGA ATTTTTATTA AAGAAAAAAG CAAATGTAAA TGCCATTGAT TATCTTGGCA
661GATCAGCCCT CATACATGCT GTTACTCTTG GAGAAAAAGA TATAGTCATT CTTCTTCTGC
721AGCACAATAT TGATGTGCTT TCTCGAGATG CGTTTCGAAA GATTGCAGGA GATTATGCCA
781TTGAGGCTAA GAATAGAGTC ATTTTTGATC TAATTTATGA ATACGAAAGA AAGAGATATG
841AAGATCTTCC TATAAATAGC AATCCAGTGT CTTCTCAGAA ACAACCAGCC TGGGCAACAG
901AGCGAGACTC CATGTCAAAA ATAAAAAAAA GAAAGTTGAT TGTTATGAAA AAAAAGTCAA
961TGGTGATTCA GAGATTTTTG GTTACATTTT GTAAATTGCC AACTTTCTTG TACAAAGTGG
1021TTGATATCGG TAAGCCTATC CCTAACCCTC TCCTCGGTCT CGATTCTACG TAGTAATGAA
1081CTAGTCCGTA ACTTGAAAGT ATTTCGATTT CTTGGCTTTA TATATCTTGT GGAAAGGACG
1141AGACCCTGAT CACACCATGC TACCGACGCG TTAAGTCgac aatcaacctc tggattacaa
1201aatttgtgaa agatt

Download FASTA (ORF) (Full)