Construct: ORF TRCN0000478493

Construct Description:

Construct Type:
ORF
Other Identifiers:
ORF009636.2_s317c1
Derived from:
ccsbBroadEn_11231
DNA Barcode:
CGGCATATTGCGATGCGTGTTATC
Epitope Tag:
V5
Notes:
No stop codon in insert

Originally Annotated References:

Gene:
ZNF33A (7581)

Vector Information:

Vector Backbone:
pLX_317
Pol II Cassette 1:
SV40-PuroR
Pol II Cassette 2:
EF1a-TRCN0000478493
Selection Marker:
PuroR
Visible Reporter:
n/a
Epitope Tag:
V5

Current transcripts matched by this ORF:

Taxon Gene Symbol Description Transcript Nuc. Match %[?] Prot. Match %[?] Match Diffs[?]
1 human 7581 ZNF33A zinc finger protein 33A NM_006954.2 99.8% 99.7% 4_7delAACAinsTTTC
2 human 7581 ZNF33A zinc finger protein 33A XM_011519650.2 99.8% 99.7% 4_7delAACAinsTTTC
3 human 7581 ZNF33A zinc finger protein 33A NM_006974.3 99.7% 99.6% 4_7delAACAinsTTTC;248_249insAGA
4 human 7581 ZNF33A zinc finger protein 33A XM_011519651.2 99.7% 99.6% 4_7delAACAinsTTTC;248_249insAGA
5 human 7581 ZNF33A zinc finger protein 33A NM_001324178.2 98.9% 98.7% 1_7delATGGCGA;10_11insTTT;13_29del
6 human 7581 ZNF33A zinc finger protein 33A XM_017016617.1 98.9% 98.7% 1_7delATGGCGA;10_11insTTT;13_29del
7 human 7581 ZNF33A zinc finger protein 33A NM_001278170.2 98.7% 98.6% (many diffs)
8 human 7581 ZNF33A zinc finger protein 33A NM_001278173.1 97.8% 97.4% 1_36del;41delC;45_61del
9 human 7581 ZNF33A zinc finger protein 33A NM_001278177.2 97.4% 96.9% (many diffs)
10 human 7582 ZNF33B zinc finger protein 33B NM_006955.3 92.1% 88.4% (many diffs)
11 human 7582 ZNF33B zinc finger protein 33B NM_001305033.2 91.2% 87.5% (many diffs)
12 human 7581 ZNF33A zinc finger protein 33A NM_001278175.2 90.2% 89.8% (many diffs)
13 human 7581 ZNF33A zinc finger protein 33A XM_011519653.2 90.2% 89.8% (many diffs)
14 human 7581 ZNF33A zinc finger protein 33A XM_011519654.2 90.1% 89.6% (many diffs)
15 human 7581 ZNF33A zinc finger protein 33A NM_001278176.2 88.4% 89.8% 0_1ins209;41_120del
16 human 7581 ZNF33A zinc finger protein 33A NM_001278171.2 86.1% 86.1% 0_1ins336
17 human 7581 ZNF33A zinc finger protein 33A NM_001278174.2 86.1% 86.1% 0_1ins336
18 human 7581 ZNF33A zinc finger protein 33A NM_001278178.1 86.1% 86.1% 0_1ins336
19 human 7581 ZNF33A zinc finger protein 33A NM_001278179.2 86.1% 86.1% 0_1ins336
20 human 7581 ZNF33A zinc finger protein 33A NM_001324175.2 86.1% 86.1% 0_1ins336
21 human 7581 ZNF33A zinc finger protein 33A NM_001324176.2 86.1% 86.1% 0_1ins336
22 human 7581 ZNF33A zinc finger protein 33A NM_001324177.2 86.1% 86.1% 0_1ins336
23 human 7582 ZNF33B zinc finger protein 33B NM_001305035.2 78.9% 75.7% (many diffs)
24 human 7582 ZNF33B zinc finger protein 33B NM_001305036.2 78.9% 75.7% (many diffs)
25 human 7582 ZNF33B zinc finger protein 33B NM_001305037.2 78.9% 75.7% (many diffs)
26 human 7582 ZNF33B zinc finger protein 33B NM_001305038.2 78.9% 75.7% (many diffs)
27 human 7582 ZNF33B zinc finger protein 33B NM_001305039.2 78.9% 75.7% (many diffs)
28 human 7582 ZNF33B zinc finger protein 33B NM_001305040.2 78.9% 75.7% (many diffs)
Download CSV

Sequence Information

Note: uppercase bases indicate empirically verified sequence.

ORF start:
69
ORF end:
2502
ORF length:
2433
Sequence:
1tcttccattt caggtgtcgt gaggctagca tcgattgatc aacaagtttg tacaaaaaag
61ttggcaccat gtttcaggta gaacagaagt cccaggagtc agtatcattt aaagatgtga
121ctgtgggctt cacccaggag gagtggcagc acctggaccc tagtcagagg gctctgtata
181gagatgtgat gctggagaac tacagcaacc ttgtctcagt ggggtattgt gttcacaaac
241cagaggtgat cttcaggctg caacaaggag aagagccatg gaaacaggag gaagaattcc
301caagccaaag ctttccagaa gtctggacag ctgatcacct gaaagagagg agccaagaaa
361accaatctaa acatttgtgg gaagttgtat tcatcaataa tgaaatgctg actaaggaac
421aaggtgatgt aataggaata ccatttaatg tggatgtaag ttcttttcct tccagaaaaa
481tgttctgtca gtgtgattca tgtggaatga gtttcaacac tgtttcagaa ttggttatca
541gtaagataaa ctatttagga aaaaagtctg atgaatttaa tgcctgtggg aaattgttac
601tcaatattaa gcatgatgaa actcatactc aagagaaaaa tgaagttttg aaaaatagga
661acacactgag tcatcatgag gagactttgc agcatgagaa gattcaaact ttagagcaca
721attttgaata cagtatatgt caggaaaccc tccttgaaaa ggcagtattc aatacacaga
781agagagagaa cgcagaagag aataactgtg attataatga atttgggaga actttgtgtg
841atagttcatc cctcttgttc catcagatat ctccgtcaag ggacaatcac tatgaattta
901gtgattgtga gaagttctta tgtgtgaagt ccaccctttc taaacctcat ggggtatcta
961tgaaacacta tgattgtggt gaaagtggga ataatttcag gaggaaattg tgtctgtcac
1021accttcagaa aggtgataaa ggagagaaac actttgaatg taatgaatgt gggaaagctt
1081tctgggagaa gtcacatctc actcgacatc agagggtgca cacaggacag aaaccctttc
1141aatgtaatga atgtgaaaaa gctttctggg ataagtcaaa cctcactaaa catcaaagat
1201cacacacagg ggagaaacct tttgaatgca atgaatgtgg gaaagccttt agccataagt
1261cagccctcac attacaccag agaacacata caggggagaa accctatcaa tgtaatgcgt
1321gtgggaaaac tttttgccag aaatctgacc tcactaaaca tcagagaaca cacacagggc
1381tgaaacccta tgaatgttat gaatgtggaa aatccttccg tgtgacttcg caccttaaag
1441tacaccagag aactcacaca ggtgagaaac cttttgaatg tcttgagtgt gggaaatcct
1501ttagtgaaaa gtcaaatctt acacagcatc agagaattca cataggagat aaatcttatg
1561aatgtaatgc atgtgggaaa actttctacc acaagtcatt actcaccagg catcagataa
1621ttcatacagg gtggaaacct tatgaatgtt atgaatgtgg gaaaaccttc tgcttgaagt
1681cagacctcac agtacatcag agaacacaca cagggcagaa accctttgca tgtcccgaat
1741gtgggaaatt ctttagccat aagtcaaccc tctctcaaca ttatagaaca cacacagggg
1801agaaacccta cgaatgtcat gaatgtggaa aaatctttta caataaatca tacctaacta
1861aacataatag aacacataca ggggagaaac cctatgaatg taatgaatgt ggaaaagcct
1921tctaccagaa gtcacaactc actcagcatc agagaattca cataggggag aaaccctata
1981aatgtaatga gtgtggaaaa gctttctgcc ataagtcagc tctaattgta catcagagaa
2041cccatacaca agaaaagccc tataaatgta atgaatgtgg aaaatctttc tgtgtaaaat
2101caggacttat tttccatgag agaaagcaca cgggggagaa accctatgaa tgcaatgaat
2161gtgggaaatt cttcaggcac aaaTCATCAC TCACAGTACA TCACAGGGCT CACACAGGAG
2221AGAAATCTTG TCAATGTAAT GAATGTGGAA AAATCTTTTA CCGTAAATCG GAACTTGCTC
2281AACATCAGAG ATCACATACA GGGGAAAAGC CCTATGAATG TAACACATGC AGGAAAACTT
2341TCTCTCAAAA GTCAAATCTC ATTGTACATC AGAGAAGACA TATAGGAGAA AACCTTATGA
2401ATGAAATGGA TATTAGAAAT TTCCAGCCAC AAGTCAGCCT CCATAATGCC TCAGAGTATT
2461CACACTGTGG AGAAAGCCCT GATGACATCC TGAATGTTCA GTTGCCAACT TTCTTGTACA
2521AAGTGGTTGA TATCGGTAAG CCTATCCCTA ACCCTCTCCT CGGTCTCGAT TCTACGTAGT
2581AATGAACTAG TCCGTAACTT GAAAGTATTT CGATTTCTTG GCTTTATATA TCTTGTGGAA
2641AGGACGACGG CATATTGCGA TGCGTGTTAT CACGCGTTAA GTCgacaatc aacctctgga
2701ttacaaaatt tgtgaaagat t

Download FASTA (ORF) (Full)